Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2073 ATGGCCATACAAGATTCAGAACGTTCCGGCGGAGGAGGAATCCGAGTCCAGGGCATGCAATTCACCTACCCAGGCCAACAACCACCGCTCTTCCTCGACTTCCACCTCGACGTCTCTCCCGGATCGCGATGTCTCCTCCTCGGCGCCAACGGATCCGGTAAAACCACCTTGCTCAAGATTCTCGCCGGGAAACACATGGTTGGAGGCAGAGACGTTGTCCGCGTGCTCAATGGTTCCGCTTTTCATGACACTCAGCTTGTTTGTAGCGGTGATCTCTCTTATCTCGGTGGATCCTGGAGTAAAACCATTGGCTGCGCTGGAGAAATTCCACTTCAAGGAGACTTTTCTGCTGAGCATATGATCTTTGGAGTTGAGGGCGCTGATCCTGACCGGAGAGATAGGTTGATTGAGCTGCTTGATATAGATCTGCAGTGGCGAATGCATAAGGTATCTGATGGGCAGCGACGTCGAGTACAAATCTGCCTTGGTCTTCTCCATCCATATAAGGTTCTCTTGCTGGATGAGGTGACTGTTGACCTGGATGTTGTTACTCGGATGGATTTATTGGATTTTTTTAAGGAAGAGTGTGAACAGAGAGAAGCTACAATTGTTTATGCAACTCACATTTTTGATGGACTAGAGACATGGGCAACTCATTTGGCATATATACAAGAGGGTGAACTGAAGAGAACAGAAAAAATATCAGATGTGAACGAGTTGAAGTCTTCAGCTAATCTGCTGTCTGTTGTTGAGTCTTGGCTACGCGCCGAAACAAAGCTTGAAAAGAAGAACCCTACTTCCAACGTTCAAAAAACTTCTAGCTCTCCGTTCTTTTCATCTAGACACATGGCATACTATCGATAG 864 0.4734 MAIQDSERSGGGGIRVQGMQFTYPGQQPPLFLDFHLDVSPGSRCLLLGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCSGDLSYLGGSWSKTIGCAGEIPLQGDFSAEHMIFGVEGADPDRRDRLIELLDIDLQWRMHKVSDGQRRRVQICLGLLHPYKVLLLDEVTVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATHLAYIQEGELKRTEKISDVNELKSSANLLSVVESWLRAETKLEKKNPTSNVQKTSSSPFFSSRHMAYYR* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2073 287 Pfam ABC transporter 34 177 IPR003439 GO:0005524
Lja5g2073 287 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 1 287 - -
Lja5g2073 287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 240 IPR027417 -
Lja5g2073 287 SMART AAA_5 40 230 IPR003593 -
Lja5g2073 287 PANTHER ABC TRANSPORTER I FAMILY MEMBER 21 1 287 - -
Lja5g2073 287 Gene3D - 13 271 IPR027417 -
Lja5g2073 287 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 14 250 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2073 Lja-Chr5 27553255 27558246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2073 12 276 Calmodulin-binding Proteins AT2G36910 23.529 2.67e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2073 K12608 - gmx:100788503 480.33