Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2036 ATGATGGAGATGGAGATGGAGATGGACGAAACTTCTGAACCCAAAGAGGAAAAGCCCGTTTTGGTGATCTTAGTGGGAGCACCGGGAAGCGGGAAATCCACCTTCTGTGAACAAGTTATGCGTTCCTCTTCTCGCCCTTGGGTTCGCGTTTGCCAGGACACTATTGGAAATGGTAAAGCAGGAAATAAAGCCCAGTGCCTAACCAGTGCAACTAGAGCATTGAAGGATGGAAAGAGTGTATTTATTGACCGGTGCAATCTTGACAGAGATCAGCGCTTAGATTTCATGAAGCTTGCTGATGGACCCCAAATAGATGTCCATGCAGTTGTACTTGATCTTCCTGCTAAGCTTTGTATTTCTCGATCTGTAAAACGAACTGGGCATGAAGGAAATCTGCAGGGTGGAAAAGCTGCTGCAGTTGTGAATAGAATGCTTCAAAAGAAAGAGATGCCAAAATTAAGTGAAGGTTTTAACCGAATAACATTTTGTCAGAGTGACAGTGATGTCAAAGATGCCATTAATACTTACAGCACGCTAAAGCCACTGGATAATCTTCCACATGGCTGCTTTGGCCAAAAGAATCCAGATTCCAAAATTCAAGTCGGTATAATGAAGTTCCTTAAAAGAGCAGAGGTCCCAGTTAATGCTGCATCTGGAGAAAAGGGCACTGAAGAATCCACTTCTGAGACACCGGGAAAAAATGATACCTGCTGCAAAGATATGGAAAAGATTCCCTCAATTCCACCTGATGCCAACTTAGAGTCAAAGGAAATAGAAGATCAAGCTGTTGGCTCTGCTGGCTCCCATGCCAATCGAGTTTCTCTGGATGATACTCCCACTCTGGCATTTCCATCTATTTCAACAGCTGATTTCCAATTCAACTATGAGAAAGCAGCTGATATTATTGTTGAGAAGGTTGCAGAGTTCTCAAATAAGCCGTGGAATGCCAGACTTGTTCTAGTTGACTTGACTCATAAGTCAAAGATTCTGTCCTTAGTTAAAGCTAAAGCAGCAGAGAAATGCATTGACACCCAAAAGTTCTCTACCCATGTTGGAGACATTACTCGTCTTCATTCCACAGGAGGTTTGCGCTGTAATGTAATAGCTAATGCTGCCAACTGGCGGTTAAAACCTGGAGGTGGAGGTGTTAATGCAGCAATTTTTAACGCTGCAGGTCCTGAGCTAGAGTCTGCAACTAAAGAAAAAGTAAAATCTCTTTCACCTGGGAATGCTGTTGTTGTCCCTCTACCACCATCTTCTCCCTTGTTCACTAGAGAGGGTGTAACCCATGTAATACATGTTCTTGGACCTAATATGAACCCACAACGACCAAATTATCTGGATAATGATTATAATAAAGGCTCTAAAATTCTCCAAGATGCTTATGCTTCACTATTTGAAGGTTTTGCATCTATTGTGAGGAACCAAGCAGAGCAACCTAGTGGAAGAAATGAAAACCTTGAAAGAAAGTTCTTGGAGTTGAAGGATCAATCAGAACACTGCTCTAGAAATCATTTCACAAACACTGTTCAAAAGAGTAAGAGAGATTCTTATCATGGGTCGGAAAAAAGCAAGAAATACAAGGAAACTCAGGATGGTTTTGGAGTGGCCTTTACTGATTCTAATGTTGAAAAGGCAGATTCAGAGCATAGAAGAACTGATGTGAGCAAGAGTAAAGCCTGGGGATCATGGGCTCAAGCTCTTCACCAAATAGCTATGAATCCTGAAAAGCATAAGGATGATTTGCTTGAAATATCAGAAGATGTTGTTGTGTTGAATGATCTGTATCCTAAGGCAAAGAAGCATGTTCTGGTATTAGCACGAACTGGAGGTCTTGATTGCCTGGCAGATGTCCAAGGTGCTCACCTTCAGTTATTGAAGACAATGCATGCTGTGGGTTTAAAGTGGGCTGAGAAGTTCTTGCACGAGAGTGCATCACTGGTCTTTCGCCTTGGATATCATTCGGCTCCATCAATGCGGCAACTACACTTGCATGTTATCAGCCAGGACTTCGAATCAAAACATTTGAAGAACAAGAAGCACTGGAACTCGTTTAACACTGCTTTCTTTCGTGACTCGGTAGATGTAATTGATGAGGTTGAGGTCTCTAATCATGGAAAAGCAGCACTGAAAGATGATGATAAGCTCATGTCTATGGAACTGAGGTGCCACAGATGTAGAAGTGCACATCCAAATATTCCGCGGTTAAAATCACATATTAGCAGCTGCCAAGCTCCCTTTCCCTCTTACCTACTTGAAAATGGACGTTTGATGCATGCACCAGGTGAACCCCACAACAATTTATAG 2307 0.4239 MMEMEMEMDETSEPKEEKPVLVILVGAPGSGKSTFCEQVMRSSSRPWVRVCQDTIGNGKAGNKAQCLTSATRALKDGKSVFIDRCNLDRDQRLDFMKLADGPQIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQKKEMPKLSEGFNRITFCQSDSDVKDAINTYSTLKPLDNLPHGCFGQKNPDSKIQVGIMKFLKRAEVPVNAASGEKGTEESTSETPGKNDTCCKDMEKIPSIPPDANLESKEIEDQAVGSAGSHANRVSLDDTPTLAFPSISTADFQFNYEKAADIIVEKVAEFSNKPWNARLVLVDLTHKSKILSLVKAKAAEKCIDTQKFSTHVGDITRLHSTGGLRCNVIANAANWRLKPGGGGVNAAIFNAAGPELESATKEKVKSLSPGNAVVVPLPPSSPLFTREGVTHVIHVLGPNMNPQRPNYLDNDYNKGSKILQDAYASLFEGFASIVRNQAEQPSGRNENLERKFLELKDQSEHCSRNHFTNTVQKSKRDSYHGSEKSKKYKETQDGFGVAFTDSNVEKADSEHRRTDVSKSKAWGSWAQALHQIAMNPEKHKDDLLEISEDVVVLNDLYPKAKKHVLVLARTGGLDCLADVQGAHLQLLKTMHAVGLKWAEKFLHESASLVFRLGYHSAPSMRQLHLHVISQDFESKHLKNKKHWNSFNTAFFRDSVDVIDEVEVSNHGKAALKDDDKLMSMELRCHRCRSAHPNIPRLKSHISSCQAPFPSYLLENGRLMHAPGEPHNNL* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2036 768 MobiDBLite consensus disorder prediction 509 529 - -
Lja5g2036 768 Gene3D Leucine Aminopeptidase, subunit E, domain 1 322 473 IPR043472 -
Lja5g2036 768 Pfam Macro domain 369 451 IPR002589 -
Lja5g2036 768 Coils Coil 484 504 - -
Lja5g2036 768 Pfam AAA domain 21 146 - -
Lja5g2036 768 Pfam C2HE / C2H2 / C2HC zinc-binding finger 686 741 IPR032566 -
Lja5g2036 768 SUPERFAMILY Macro domain-like 277 325 IPR043472 -
Lja5g2036 768 SUPERFAMILY HIT-like 559 727 IPR036265 -
Lja5g2036 768 ProSiteProfiles Macro domain profile. 334 514 IPR002589 -
Lja5g2036 768 Pfam Scavenger mRNA decapping enzyme C-term binding 570 681 - -
Lja5g2036 768 ProSitePatterns HIT domain signature. 650 668 IPR019808 -
Lja5g2036 768 MobiDBLite consensus disorder prediction 220 234 - -
Lja5g2036 768 SUPERFAMILY Macro domain-like 328 466 IPR043472 -
Lja5g2036 768 MobiDBLite consensus disorder prediction 216 252 - -
Lja5g2036 768 Gene3D - 2 178 IPR027417 -
Lja5g2036 768 PANTHER APRATAXIN-RELATED 18 762 - -
Lja5g2036 768 PANTHER APRATAXIN 18 762 IPR026963 GO:0003677|GO:0006281|GO:0033699
Lja5g2036 768 Gene3D - 563 746 IPR036265 -
Lja5g2036 768 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 163 IPR027417 -
Lja5g2036 768 SMART YBR022w_8 346 481 IPR002589 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2036 10 758 C2H2 Transcription Factor Family AT5G01310 57.467 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2036 K10863 - gmx:100786762 1243.02