Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2024 ATGGGCAAGTACATGAAGAAAGCCAAACCCAGAGGCGAAGTCGCTCTACTAGACTCCACCGCCACCAACAACACCACCACCAACACCACAACAACCTCTTACTTCGGGGTTCGAACCCGCGCCAAAACCCTAGCTCTCCAGAAATCGCAGCTTCAGCAACCGGACCTCTCTCCCTCCTCTGGCTCCTACCTTCAGCTTCGCAGTCGTCGCCTCCACAAACCCCCTGTTCCGCTACATGCTTCTCCCAAGCGACCCAAGTCGCAAAACCCTAAATCCCCAATTCCTAGCCCTAGTGCTCCCAGTCTCGCTTCCCAGCATGATGGTAACACCCTGCCGGAGAAGAAAACGCAGCACCAGAATAATTCCGATGGGGATGAAGCTTGCTTTGGTGAAAATGTCTTGGATTTTGAAGGTAGAGAAAGCAGAAGCACCAGGGAATCCACACCCTGCAATTTGATAAGGGACCCAGACACTGTCAGGACTCCTGGTTCAACTACCAGGCCTACTTGCTCAACTGAAGCTCCTCGAAGAACACCGCATGCGGGTCGAAGGCAAATCCCTACTGCACATGAAATGAATGAATTCTTTGCTGAAAATGAAGAGGCTCAGCAAAGGAAATTCATTGAGAAGTACAACTTTGATCCTGTGAATGAGAAGCCGCTCCCTGGGCGTTATGAATGGGAAAAATTGAAACCCTAG 699 0.5093 MGKYMKKAKPRGEVALLDSTATNNTTTNTTTTSYFGVRTRAKTLALQKSQLQQPDLSPSSGSYLQLRSRRLHKPPVPLHASPKRPKSQNPKSPIPSPSAPSLASQHDGNTLPEKKTQHQNNSDGDEACFGENVLDFEGRESRSTRESTPCNLIRDPDTVRTPGSTTRPTCSTEAPRRTPHAGRRQIPTAHEMNEFFAENEEAQQRKFIEKYNFDPVNEKPLPGRYEWEKLKP* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2024 232 PIRSF CKI_KRP_plant 1 232 IPR044275 GO:0004861|GO:0045736|GO:0051726
Lja5g2024 232 Pfam Cyclin-dependent kinase inhibitor 186 230 IPR003175 GO:0004861|GO:0005634|GO:0051726
Lja5g2024 232 MobiDBLite consensus disorder prediction 98 126 - -
Lja5g2024 232 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4 1 230 - -
Lja5g2024 232 MobiDBLite consensus disorder prediction 158 173 - -
Lja5g2024 232 MobiDBLite consensus disorder prediction 1 33 - -
Lja5g2024 232 MobiDBLite consensus disorder prediction 17 33 - -
Lja5g2024 232 MobiDBLite consensus disorder prediction 73 184 - -
Lja5g2024 232 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 230 IPR044275 GO:0004861|GO:0045736|GO:0051726
Lja5g2024 232 Gene3D p27 182 232 IPR044898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2024 Lja-Chr5 26475413 26478088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2024 1 232 Core Cell Cycle Gene Families AT5G48820 39.535 9.36e-43 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2024 - - gmx:100781000 287.73