Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1935 ATGGCCAAAAGGAGTGTTGCTACCATGGCTTTACCATTATTCCTAAGCATTTTCATTTCCATCTTCTTGATTTCCATAACTTGCTTTCAAGAAGAGCGATCGATATACTTGGTCTTATTAGAGGGAAATGGGGTTGCATTTCATGAAGGCCTATGTGATGGAGATTCATCAAGAATTGACCCCAACAGCGAAGCCTCGAAGGCGCGTGCAAATCACTTATTGGCATCTCACGATCTACTTCTGCAAAGCACTTTAGACAAAGGAGGCTACAATAAACTCCACAGTTTCAAACACATTATTAATGGTTTTTCTGTCCACACAACCCCTTCCAAGGCTAAAAAGTTGAAAGGTGTTCCGGGAGTGAAGTTGGTAGCAAAAGACAGAGGAGCTAAAAAGATGACAACTTACACTCCTGACTTTCTAAATTTACCAAAAGGAATATGGGCAGAGGAAGGAGGAGTCAAAAATGCAGGGGAAGGAGTTGTTATTGGTTTTGTTGACACTGGCATCAACCCACATCACCCAAGCTTTGCTTACAACCCTTTGCACCCTTTCAATTCAAGTCCCTCTCCTTTCAGAGGTGAATGTCAATCTGGTCCAATGTTCCCAGACACGTCTTGCACTGGAAAGATAGTGTCAGCTAGGTACTTCTCAGCTGGGGTTGAAGCTGCTACCACCCTCAATGCTTCAGTAGATTTTCTTTCACCGTTTGATGCAGATGGACATGGCAGTCATGTGGCATCTATTGCTGCTGGAAATGCTGGTGTTCCTGTTGTTGTAAATGGTTTGTTCTATGGGCGATCCAGCGGAATGGCGCCGCGTGCAAGGATTGCTGTTTATAAGGCTGTCTATCCAACAGCGGGAACTGAAGCAGATGTCATTGCAGCTATCGATCAAGCTGTGATGGATGGGGTGGATATCATAAATCTCTCTATTGGACCAAATGAACCCCCAGAAGACACATTGACCTTTTTGGGCTTGTTTGAGATTTCCTTGCTATTTGCAAGAAAAGCAGGAGTTTTTGTGGTGGAAGCTGCAGGGAATAAAGGTCCAGCACCTTCATCTGTAATGTCATTCAGTCCCTGGAGTGTGAGTGTTGGCGCTTGCAACACAGATAGAAAGTACCATGCTTCACTTCACCTTGGAAATAGCCAAACAATCGATGGAGTTGGACTATCAGGACCCAGTTTGCTAGCTTTGTTTAAGCTAGTATTGGCTAAGGATGCAATGAAAACAAATGGAACATTCCCAAGGACTCCAGAGTACATAGAAGAGTGTCAACATCCAGAAGCTTTGGACCCTAAGATAGTGTTAGGAAGTGTCGTTATCTGCAATTTCTCAGCAGGTTTCTCTAATGGAACATCAACTCTGGCTGCCATTGTTGACACCACAAAGGCTCTAGGATTCGAGGGTTTTATTCTAGCTGCAAACCCAACCTATGGTGATTATGTTGGACAGCCAATTCCTTTTGCCATTTCTGGTATTTTGATCCCTCGTGTGGCTGATGCTCAGGTTCTATTACAGTACTATGAAGAACATACCAAGAGGGATGAGAGAGGAACTGCCATAGAATTTGGTGCTGTTGCAGCTGTGGGGGAAGGAAGAATTGCCTCTTTCACGGGGCGATCACCCGTTGTGAGTAGATTTTCTTCAAGGGGTCCAAATATCATTGACAAGGACAAAGATCCTGCTGATGTACTTAAACCTGATGTTCTTGCTCCAGGGCACCAAATATGGGGAGCCTGGAGCCCCATGAGTGTCACAGCACCTGAGCTGAGAGGAGACAATTTTGCAATAATTTCTGGTACCAGCATGGCCGTGCCTCATGTGGCTGGAATAGCTGCACTTATCAAGCAGTATAATCCATCATGGGATCCATCAATGATAGCATCAGCAATCACCACAACCAGCACAAAGTATGATAATCTTGGAGAGCTTATCATGGCTGAAGGCTATGGTATCAACACCTTGTATCCTTCCACTCCTTTTGACTATGGGGCAGGCATTGTGAACCCCAACTGGGCCAGAGATCCAGGCTTGGTACTTCCATCAGGATTTGCAGACTACATCAGGTTCTTGTGCTCCGTGCCAAACGTCGACAAGGGCAAGGTAAATGCAACCACTGGAGAACAATGCCATAACCCGTTTGACTATCCATTCAATCTAAACCTTCCTTCCGTAACTATATCTGCATTGAGAGGATCAGCTTCTGTGCGGAGAACTGTTATGAATGTAGGAAACTATACAGAGACATACATAGGCTCTGTTCTACCTCCAAATGGAACTATAGTCAACCTGTGCCCAACTCTATTTACCATAAGTCCACAAGGAAAACAAGAACTTGAAATAAAGCTCACTGTCATCCAACCAACGCAAAATTTTAGCTTTGGTCAGATTGTTTTGATAGGAAACTTGAACCACATTGTAAGAATTACATTGTCAGTTCTACCAGTTTCAGTACATTGA 2466 0.4416 MAKRSVATMALPLFLSIFISIFLISITCFQEERSIYLVLLEGNGVAFHEGLCDGDSSRIDPNSEASKARANHLLASHDLLLQSTLDKGGYNKLHSFKHIINGFSVHTTPSKAKKLKGVPGVKLVAKDRGAKKMTTYTPDFLNLPKGIWAEEGGVKNAGEGVVIGFVDTGINPHHPSFAYNPLHPFNSSPSPFRGECQSGPMFPDTSCTGKIVSARYFSAGVEAATTLNASVDFLSPFDADGHGSHVASIAAGNAGVPVVVNGLFYGRSSGMAPRARIAVYKAVYPTAGTEADVIAAIDQAVMDGVDIINLSIGPNEPPEDTLTFLGLFEISLLFARKAGVFVVEAAGNKGPAPSSVMSFSPWSVSVGACNTDRKYHASLHLGNSQTIDGVGLSGPSLLALFKLVLAKDAMKTNGTFPRTPEYIEECQHPEALDPKIVLGSVVICNFSAGFSNGTSTLAAIVDTTKALGFEGFILAANPTYGDYVGQPIPFAISGILIPRVADAQVLLQYYEEHTKRDERGTAIEFGAVAAVGEGRIASFTGRSPVVSRFSSRGPNIIDKDKDPADVLKPDVLAPGHQIWGAWSPMSVTAPELRGDNFAIISGTSMAVPHVAGIAALIKQYNPSWDPSMIASAITTTSTKYDNLGELIMAEGYGINTLYPSTPFDYGAGIVNPNWARDPGLVLPSGFADYIRFLCSVPNVDKGKVNATTGEQCHNPFDYPFNLNLPSVTISALRGSASVRRTVMNVGNYTETYIGSVLPPNGTIVNLCPTLFTISPQGKQELEIKLTVIQPTQNFSFGQIVLIGNLNHIVRITLSVLPVSVH* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1935 821 Pfam Peptidase inhibitor I9 65 128 IPR010259 -
Lja5g1935 821 ProSitePatterns Serine proteases, subtilase family, serine active site. 602 612 IPR023828 -
Lja5g1935 821 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 45 811 IPR045051 -
Lja5g1935 821 Pfam Fibronectin type-III domain 721 815 IPR041469 -
Lja5g1935 821 Pfam Subtilase family 158 642 IPR000209 GO:0006508|GO:0008236
Lja5g1935 821 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 132 IPR037045 -
Lja5g1935 821 SUPERFAMILY Subtilisin-like 133 680 IPR036852 GO:0004252|GO:0006508
Lja5g1935 821 Gene3D - 372 532 - -
Lja5g1935 821 CDD PA_subtilisin_like 381 510 - -
Lja5g1935 821 Gene3D Peptidase S8/S53 domain 160 689 IPR036852 GO:0004252|GO:0006508
Lja5g1935 821 PRINTS Subtilisin serine protease family (S8) signature 158 177 IPR015500 -
Lja5g1935 821 PRINTS Subtilisin serine protease family (S8) signature 238 251 IPR015500 -
Lja5g1935 821 PRINTS Subtilisin serine protease family (S8) signature 601 617 IPR015500 -
Lja5g1935 821 Gene3D - 693 816 - -
Lja5g1935 821 ProSitePatterns Serine proteases, subtilase family, histidine active site. 242 252 IPR022398 -
Lja5g1935 821 ProSiteProfiles Serine proteases, subtilase domain profile. 135 676 - -
Lja5g1935 821 PANTHER SUBTILISIN-LIKE PROTEASE SBT2.6 45 811 - -
Lja5g1935 821 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 163 174 IPR023827 -
Lja5g1935 821 CDD Peptidases_S8_3 131 638 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1935 Lja-Chr5 24000450 24005614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1935 35 815 Subtilisin-like Serine Gene Family AT1G62340 59.545 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1935 - - gmx:100798915 1172.53