Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1925 ATGACAACTCTTGTAGGAGACAACAACCAAAACTTGGAAAAACATATTCACAAACAGATGGGGTGCATGGCTGGTTTCCTTCAGATCTTCGATCGCCACCAAATCCTCTCCCCAAAACGCATCTACTCCACCAAAAGACTCCCTCCTCCGCCAACTCCTCCGGATTCTTCGCCGGAAGCGCTCCAACACGGCGTATCTCCGGCGAGGGAGGCGCAACCTGAGCCAAAGGTAGTAGTAACCAAGGCGAACCCACCGCCACCGGCACTTCCTGTTCTGGAATTCAAGGAAGGCACGAGATCCTCATGGAAATTCTCCAGAGAAGCTCCTAGGCTGTCCCTCGATAGCAGAGCCGTGGTGGATGCCAAGGGGAGCCTTCACCCCCGAACCGACACCACCGCCGCCGCCGTTGAAGACAAACAGCGCCGTTCCACCAGCGTCATCGCCAGGCTCATGGGGTTAGGCCCAATACCGGATTCGGATCCGGAACCGGGTGCTAAGCTCCGGAGATCCGCTTCCGAGTCGAGGGTGCCCAGAGATCTGCCGCTGCCATTGCCGCCGCAGTGTCGCTTCTTCGAATCCAAGGCTAACAGTTTTCATCATCAGGAGAGTAATGTTGTGAATGCTAACTGTAATGGCAATGGTAATGGTTGTGCTGGTACGGAGAATCACCGATTGGGGGTTTCTCCGGCTAGAGCTTCAGCTCCGGTGAGGCAGAGAGGAGGAACAACGATGACGCAGAAGAAGAGTTTCTATGATTCAACTGATTTCTTCCCTGAACCGAAGGACATGGATGCAATCTACGGTGTGATTGAGAGGAGGTTGAGGATGAGAGGGATCAACCAGCCTTCTCAGGATCTCCACACTCTCAAGAACATCTTGGAGGCTCTGCAGCTCAAAGGCCTTCTCCATTCCGAAAAGCCTAACCAATCTCCCATTGTGGTCATGAAACCGGGTAGATCCTCATCCGGTTCGGCGAATCATTACCGAACCGGGTATGAGTCCCCGCCTCCGCACTCGTCGTTCCGGTCATCCAGTCCTCGGGCTCGGAACAACCGGAGTCCGAGCCCGAGCGAGTCTGACCGGAACGTGAGTGCGAGAAACCAATCCAGGGTCAGAAACACGAGCCCGAACCGGAGGAAGGTCCAGAATGTGGAGACGACGCGGAGGAAAGTTAGCAATGACGGTGGTTCTGATTCGAGAAGGGTGTCTCCGGTTAATTCGCCTAAGATTAGCACAAGGAAAAATCCAGCGAATCAGGGAGTGACATGTGGATCATCTCCTAGATTGAGAAAACCAATTGATTCTCCTAAGATGAAGGTTTTGGGTTTAGCAGAGGATGAATCTTCCACAGTTTCAGAGAACAGTTTCAGCACCTCTTCACACACTGATACAGAGAGGTACAAGATGGAAGAGTACAGAGAAGGGAAGAATCTGCTGGACAGGTGTGATAAACTGCTGAACAGCATAGCTGAAATAACAGCAGCGAACGAGTTACAACCGAGTCCTGTATCGGTGCTTGACTCGTCGTTTTACAAGGACGAGTGGTGTTCACCTTCCCCAATACCCAAACGGTGCATTGATTATAAAGATCAAGCGTTGGATTCAGAAGATGACATGTGGAGTTCAGCATTGTGCAGTTCGGAGGATGCTGCGGCGGCGGAGGAGGAGGACAGCGATCTGGTTTACGTATCGGAGATTCTGCGAGCTAGCAGTTACTTGCCGGAGGAGAGCGATGTTTTCGTGTTACTGGAGAAGCGGAAGGGGAAGGACACGTCGAGAGCTTCAAAGCTACAGAGGCGGTTGATTTTCGACACGCTGCAGGAGATTCTGAACCGGAACCAGAAACTCCCGCCGTGGAAGGCGGCAGCGAGGGGGGAGGAGACGGTGTGGTCGGAGTTTCGGAGGATCCGTGACAGGGAGGAGTCGGCGTCGGAGGATATGTTCGGGGTGATATGCGGCGTGTTGAGGAAGGACATGGCGGCGGAGATGAGTGGTTGGGGTGAATGGACGGTGGAGATGGGCGACGTCGTTTTGGATATCGAACGCCTCGTTTTCAAGGATCTCATTGGCGAAACGATACAACAACTCGCTTCATTTGGACCTCAATGTAACAACAGCAACAAAGTTTCAGCACTTCGTAGGAAGCTAGTATTTTGA 2157 0.528 MTTLVGDNNQNLEKHIHKQMGCMAGFLQIFDRHQILSPKRIYSTKRLPPPPTPPDSSPEALQHGVSPAREAQPEPKVVVTKANPPPPALPVLEFKEGTRSSWKFSREAPRLSLDSRAVVDAKGSLHPRTDTTAAAVEDKQRRSTSVIARLMGLGPIPDSDPEPGAKLRRSASESRVPRDLPLPLPPQCRFFESKANSFHHQESNVVNANCNGNGNGCAGTENHRLGVSPARASAPVRQRGGTTMTQKKSFYDSTDFFPEPKDMDAIYGVIERRLRMRGINQPSQDLHTLKNILEALQLKGLLHSEKPNQSPIVVMKPGRSSSGSANHYRTGYESPPPHSSFRSSSPRARNNRSPSPSESDRNVSARNQSRVRNTSPNRRKVQNVETTRRKVSNDGGSDSRRVSPVNSPKISTRKNPANQGVTCGSSPRLRKPIDSPKMKVLGLAEDESSTVSENSFSTSSHTDTERYKMEEYREGKNLLDRCDKLLNSIAEITAANELQPSPVSVLDSSFYKDEWCSPSPIPKRCIDYKDQALDSEDDMWSSALCSSEDAAAAEEEDSDLVYVSEILRASSYLPEESDVFVLLEKRKGKDTSRASKLQRRLIFDTLQEILNRNQKLPPWKAAARGEETVWSEFRRIRDREESASEDMFGVICGVLRKDMAAEMSGWGEWTVEMGDVVLDIERLVFKDLIGETIQQLASFGPQCNNSNKVSALRRKLVF* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1925 718 MobiDBLite consensus disorder prediction 42 84 - -
Lja5g1925 718 MobiDBLite consensus disorder prediction 152 180 - -
Lja5g1925 718 MobiDBLite consensus disorder prediction 336 381 - -
Lja5g1925 718 PANTHER LONGIFOLIA PROTEIN 1 718 IPR033334 GO:0051513
Lja5g1925 718 MobiDBLite consensus disorder prediction 307 467 - -
Lja5g1925 718 MobiDBLite consensus disorder prediction 447 462 - -
Lja5g1925 718 PANTHER OS11G0587300 PROTEIN 1 718 - -
Lja5g1925 718 MobiDBLite consensus disorder prediction 314 329 - -
Lja5g1925 718 MobiDBLite consensus disorder prediction 382 396 - -
Lja5g1925 718 MobiDBLite consensus disorder prediction 397 425 - -
Lja5g1925 718 Pfam Domain of unknown function (DUF4378) 559 691 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1925 Lja-Chr5 23787849 23791071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1925 445 718 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 46.831 4.47e-68 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1925 - - lja:Lj5g3v1014900.1 1121.3