Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1912 ATGGCTTATGCTGATGAAATTTCAGCTCTCAAACAAATCAAATTGCATCTTCTAGGTGAACTCTCTCCACTCCCAACTCCCAAAAACAATCAACAACCACAACAACAACCTTGGTTTCAACAATTTGATGAAACAACAACATCAAACACTAGCCCCTCTCAATCTTCCTCCTCTGATTCTTCTTCCTCTTCTTCCAATATCTCTCTAGATCATTACTTCCCTGAAATCGTTGATAACCAAAATCAACTTCCTCTCTTTGAGTTTGAGTTCAAACCACACCTGATTGACCTCGAAACACCAGTTGCTCCTCCACCACAACGCCTCACACGGAAGCCTTCGCTGCAAATCGCTCTACCTAGGAAGACAACCGAGTGGATCCAGTTCGGAAACCCGGATCAGAATCCGGAACCGGTGGTGCAGGCCCAACCGAAACCCGTGGAGAAGAAACAGCACTACAGAGGAGTTCGCCAGAGACCTTGGGGGAAGTTCGCCACTGAGATTCGCTACCCGAACAAATCACTCCCAACGACGTCGTCGTCGCCCTCCGAAACGGTCATTGCTACTTCACCCTTCTTCAATTCCTCTTAA 588 0.4711 MAYADEISALKQIKLHLLGELSPLPTPKNNQQPQQQPWFQQFDETTTSNTSPSQSSSSDSSSSSSNISLDHYFPEIVDNQNQLPLFEFEFKPHLIDLETPVAPPPQRLTRKPSLQIALPRKTTEWIQFGNPDQNPEPVVQAQPKPVEKKQHYRGVRQRPWGKFATEIRYPNKSLPTTSSSPSETVIATSPFFNSS* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1912 195 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 5 173 - -
Lja5g1912 195 MobiDBLite consensus disorder prediction 171 195 - -
Lja5g1912 195 MobiDBLite consensus disorder prediction 126 157 - -
Lja5g1912 195 MobiDBLite consensus disorder prediction 24 68 - -
Lja5g1912 195 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 5 173 - -
Lja5g1912 195 MobiDBLite consensus disorder prediction 21 68 - -
Lja5g1912 195 ProSiteProfiles AP2/ERF domain profile. 151 195 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1912 Lja-Chr5 23511605 23512192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1912 1 189 AP2-EREBP Transcription Factor Family AT4G17490 39.303 4.44e-21 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1912 K09286 - gmx:100800453 133.65