Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1888 ATGATGGAGATTGAATCCAAGTGGGTGGTCCTCATGGCCATTGCTGTTTTGATGTTGAGATACCTTCTCAAGAATGTAAATTGGTGGTTGTATGAATCTAAATTGGGTAAGAAGCAGTACTCACTGCCCCCTGGTGACATGGGTTGGCCCTTCATTGGCAACATGTGGTCTTTCCTTAGAGCTTTCAAGTCCAGGGACCCTGATTCCTTCATGTCCTCTATTGTCGCTAGATATGGACGAATCGGAATATACAAGGCCTTCATGTTTGAGAACCCAAGTGTGATTGTGACAACCCCTGAAGCATGCAAGAGAGTTCTGACAGATGACACTAAATTTGAACCTGGTTGGCCTCGCTCTGCAATAGAACTCATTGGAAAGAAGTCATTCGTGTCAATTGAGTATGAAGAACACAAGCGTCTTAGGCGCCTGACATCGTCTTCAATCAATGGCATGGAAGCATTGTCTCTGTACTTGAGATACATTGAAGAAAATGTTATAAGTTCCTTGGAGAAATGGTCCAACATGGGAGAAATTGAATTCTTAACTCAGATCTCAGAAAGTGAACATGTCATGGAGGCTTTGGAAAGAGAATACACTCAACTTAACCAAGGAGTTAGAGCCATGCGGATTAATATTCCTGGATTTGCATACCACAAGGCATTCAAGGCGAGGAAAAAACTACTTGTCATATTCCAATCTATTGTGGACGAGAGAAGAGAGCAAAGGAAGACATTTGTACCAAAAAAAGCCAAAGATATGATGGATGCTCTGATTGATGTTGAAGATGATAAAGGGAGAAAGTTGAGTGATGAGGAAATCATTGATATCATGTTGATGTACTTGAATGCTGGTCATGAATCTTCAGGACATATCACCATGTGGGCTAAGGCAGAACAAGAAGAAATGATAAAGAAAAGGCCTCCAACACAGAAAGGGTTGACTCTTAAGGAAATTCGACAGATGGAATTTCTTTATAAGGTGATTGATGAAACATTGCGTGTGATTACATTCTCACTTGTGGTATTTCGAGAGGCAAAGTCTGATGTCAATATAAATGGTTACATCATTCCAAAAGGTTGGAAAGTGCTGGTTTGGTTTAGGTCGGTTCATCTTGATCCTGAAATAAATCCTGATCCAATGCAATTTAATCCTAATAGATGGAATGAACACAAGGCTGGGGAATTCCTTCCCTTTGGAGCAGGAACTAGATTGTGTCCAGGCAATGATCTAGCCAAGATGGAAATTGCAGTTTTTCTTCATCATTTCATCATGAATTACCAATACTTACCTCATCCAAGGCCAATGGACAATTGCTTGGCAAGGATCAGGAAATGTTCACCTACATCAACCTAA 1353 0.4072 MMEIESKWVVLMAIAVLMLRYLLKNVNWWLYESKLGKKQYSLPPGDMGWPFIGNMWSFLRAFKSRDPDSFMSSIVARYGRIGIYKAFMFENPSVIVTTPEACKRVLTDDTKFEPGWPRSAIELIGKKSFVSIEYEEHKRLRRLTSSSINGMEALSLYLRYIEENVISSLEKWSNMGEIEFLTQISESEHVMEALEREYTQLNQGVRAMRINIPGFAYHKAFKARKKLLVIFQSIVDERREQRKTFVPKKAKDMMDALIDVEDDKGRKLSDEEIIDIMLMYLNAGHESSGHITMWAKAEQEEMIKKRPPTQKGLTLKEIRQMEFLYKVIDETLRVITFSLVVFREAKSDVNINGYIIPKGWKVLVWFRSVHLDPEINPDPMQFNPNRWNEHKAGEFLPFGAGTRLCPGNDLAKMEIAVFLHHFIMNYQYLPHPRPMDNCLARIRKCSPTST* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1888 450 PANTHER CYTOCHROME P450 26 14 427 - -
Lja5g1888 450 Gene3D Cytochrome P450 32 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1888 450 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 398 407 IPR017972 GO:0005506|GO:0016705
Lja5g1888 450 Pfam Cytochrome P450 43 172 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1888 450 Pfam Cytochrome P450 189 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1888 450 Coils Coil 184 211 - -
Lja5g1888 450 PRINTS B-class P450 signature 132 143 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1888 450 PRINTS B-class P450 signature 326 337 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1888 450 PRINTS B-class P450 signature 343 370 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1888 450 PRINTS B-class P450 signature 396 405 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1888 450 PRINTS B-class P450 signature 405 416 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1888 450 PRINTS B-class P450 signature 371 386 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1888 450 PANTHER ENT-KAURENOIC ACID OXIDASE 2 14 427 - -
Lja5g1888 450 SUPERFAMILY Cytochrome P450 38 434 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1888 Lja-Chr5 23018674 23023668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1888 8 442 Cytochrome P450 AT1G05160 61.635 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1888 K04123 - gmx:100781238 746.503