Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1887 ATGGAGCTTGAAACCTTAGCTCCATTGCTTCTTCTCTTCACTACTGTCATTTGGTTCTTAGCCACCACAACATTATTAAAATCCTCAAATCCCAAAACCACACCACAATCTTCCACTTCCACTACCACCGCCATTCCCAAACCTTACCCCATCATCGGCTCCGTCTTTCAAATCACTGCCAATAGTCACCGCCGCATTCACTGGGTCGCCGACATCCTCCGCACCTCCTCCACCTTCGTCCTCCACCGTGCCTTCGGCTCCCGCCAGGTTTTCACAGCAAACCCCGCCGTAGTCCAGCACATTCTCAAGACCAACTTCCCCTGCTACCGCAAAGGCCCCACTCTCCGCCGCGCCGTCGGGGATTTCCTCGGCGACGGCATCTTCAACGCTGACGGCGACAACTGGAAGTTCCAGCGCCAAATCTCTAGCCACGAGTTCAACACCCGCTCCCTCCGCCGATTCGTTGAAACCGTCGTCGACGGCGAACTCTCCGACCGCCTTATCCCTATCCTCTCCCAAGCGGAACTCAACAAAACCACCCTCCCTGACTTCCAAGACATCCTCCAACGCTTCACGTTTGACAATATCTGCAGAATCGCCTTCGGTTTCGACCCGGAGTATCTCCTCCCTTCCCTCCCGGAAACCGCGTTTGCCAAAGCCTTCGACGACGGAACTCGAATCAGCAGCGAGAGGTTCAACGCCGCAGTTCCCTTGCTCTGGAAATTGAACCACCTCCTCAACGTTGGCTCCGAGAAGCGTCTCAGAGAAGCCATCGCCGAGGTTCGTGGCCTCGCCGGAAAAATCGTAAGGGAGAAGAAGCAACACCTTCAATCAAAACCGGAATCTGAACCTGAATCGTTGGATCTATTGTCACGATTTCTGAGGAGTGGCCATTCCGATGAGCAATTTGTGACGGACATTGTGATAAGCTTCATCCTCGCCGGGAGAGACACCACCTCCGCCGCACTCACGTGGTTCTTCTGGCTTCTCTGGAAGCATCCTCACGTGGAGCGTCACGTGCTGGGGGAGGTGACGGGGAAATCGGAGGCGTTGGTTTTCGATGAGGTGAAAGACATGGTGTACACTCACGCGGCGTTGTGCGAGAGCATGAGGTTGTACCCGCCGGTGCCGGTGGACACGAAGGAGGCGGCGTACGACGACGTTTTACCAGATGGGACGGTGGTGAAGAAAGGGTGGAGGGTGGCGTATCATGTTTACGCGATGGGGAGATCCGAGAAAATATGGGGCTCCGATTGGGGTGAGTTTCGACCTGAGAGGTGGTTGAATCGGGTTGAGGATGATGGGAAGTGGGTTTTTGTTGGGGTGGATCCGTTTAGCTACCCGGTGTTTCAGGCGGGGCCGAGAGTGTGTTTGGGGAAGGAAATGGCGTTTTTGCAGATGAAGAGGGTGGTGGCTGGGGTTATGAGGAGGTTTAAGGTTGTGCCGGCGGTGGCGGAAGGGGTGGAGCCGGAGTACACGGCGCACCTTACGTCGTTGGTGAAAGGTGGCTTGCCCGTTAGGATTGAGGAGCGCAGGTGA 1539 0.5575 MELETLAPLLLLFTTVIWFLATTTLLKSSNPKTTPQSSTSTTTAIPKPYPIIGSVFQITANSHRRIHWVADILRTSSTFVLHRAFGSRQVFTANPAVVQHILKTNFPCYRKGPTLRRAVGDFLGDGIFNADGDNWKFQRQISSHEFNTRSLRRFVETVVDGELSDRLIPILSQAELNKTTLPDFQDILQRFTFDNICRIAFGFDPEYLLPSLPETAFAKAFDDGTRISSERFNAAVPLLWKLNHLLNVGSEKRLREAIAEVRGLAGKIVREKKQHLQSKPESEPESLDLLSRFLRSGHSDEQFVTDIVISFILAGRDTTSAALTWFFWLLWKHPHVERHVLGEVTGKSEALVFDEVKDMVYTHAALCESMRLYPPVPVDTKEAAYDDVLPDGTVVKKGWRVAYHVYAMGRSEKIWGSDWGEFRPERWLNRVEDDGKWVFVGVDPFSYPVFQAGPRVCLGKEMAFLQMKRVVAGVMRRFKVVPAVAEGVEPEYTAHLTSLVKGGLPVRIEERR* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1887 512 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 8 508 - -
Lja5g1887 512 PANTHER CYTOCHROME P450 8 508 - -
Lja5g1887 512 SUPERFAMILY Cytochrome P450 46 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1887 512 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1887 512 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1887 512 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1887 512 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1887 512 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1887 512 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1887 512 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1887 512 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1887 512 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1887 512 Pfam Cytochrome P450 46 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1887 512 Gene3D Cytochrome P450 34 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1887 Lja-Chr5 22994288 22996061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1887 2 511 Cytochrome P450 AT5G63450 46.693 1.43e-145 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1887 K20769 K20768 ag:AAG33645 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1887 5 22994288 22996061 Lja5g1887 5 22994288 22996061 ECH
Lja1g1057 1 10553992 10555734 Lja5g1887 5 22994288 22996061 PCT