Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja5g1880 | ATGATGCAGGGCATTCTAGAAAACGTTGTTGCCGGTTCTCACGTCTGGGTTGGAGATCCAGAACTAGTTTGGATTGATGGACAAGTTTTGAATATTAATGGAGAAGAAGCTGAAATTCAAACAAGCAATGAGAAGAAGGTTGTTTCCCGTTTATCAAAGCTACATCCCAAGGATACAGATGCTCCTACTGATGGAGTTGATGACATGACCAAGCTTGCTTATCTGCATGAGCCTGGAGTGTTGCATAATTTGGAAACTAGATACAAGATCAATGAAATATATACTTATACTGGAAATATTCTTATTGCGATAAATCCCTTCCAAAGTCTTCCTCATCTGTATGATGTTAATGTGATGAAAAGTTACAAGGGAGCAGTAGTTGGAGATTTAAGCCCACATGTTTTTGCTATTGCTGAAGCAGCGTATAGGGCCATGATTACTGAGGAGAAAAGCAACTCTATTCTGGTTAGTGGCGAGAGTGGTGCTGGAAAGACAGAAACCACCAAAATGCTAATGTGTTACCTGGCATTTTTGGGGGGTCACACTGCATCTGAAGGACGGACTGTTGAAAAACAAGTTCTAGAATCAAACCCAGTCCTTGAAGCATTTGGTAATGCAAAAACTGTAAGAAATGACAATTCCAGCCGTTTCGGAAAATTTGTTGAGATTCAATTTAATAAGTATGGACGAATATCCGGGGCAGCCATTAGAACTTATCTGCTGGAGAAATCTCGCGTTTGCCAAATCTCAGATCCTGAGCGTAATTATCACTGTTTCTACCTTCTCTGCGCTTCTCCTCCTGAGGATAAGGAGAAATATAAGTTGGGAGATCCCAGATCATTTCACTACCTTAATCAATCCAGTTGCTATGAATTAGCTGGTGTAAATGCTGCTCAAGAGTATCTTAGCACCAAGAGAGCCATGGATATCGTGGGAATCAGTCAGGAGGAGCAGGATGCAATTTTCAGAGTTGTAGCTGCTATTCTTCATCTTGGAAACATTAAGTTTGCAAAGTCAGAAGATTCTGATTCATCAGTTCTAGAAGATGAAGAATCCATTTTCCGTCTCCAAACAACAGCAGAACTTCTAATGTGTGAACCTGATGCTTTAGAAGTCGCACTTTGTAAGCGCGTGATGATCACCCCAGAAGAAATCATCAAGAGAAGTCTTGATCCTATTGGTGCAACAGTTAGCAGGGATGGTCTAGCCAAGACATTATATTCTCGTTTATTTGACTGGATAGTCAATAAAATCAATAACTCCATTGGGCAGGATCCTAGCTCAAAATATCTCATTGGTGTTCTTGACATATACGGCTTTGAAAGCTTTCGAACTAATAGTTTTGAGCAATTTTGTATTAATTTCACAAATGAAAAGCTGCAGCAGCACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAGGAATACACAAAAGAAAGGATTGACTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTATTGGATCTCATTGAAAAGAAACCGGGTGGAATCATAGCTCTGCTTGATGAAGCTTGTATGTTTCCCAAGTCAACTCATGAAACATTTGCACAAAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATCAAGCCTAAATTGGCACGCTCTGACTTTACTATTGTTCATTATGCAGGGGAGGTTCAGTATCAGTCTGAGCAGTTTATAGACAAAAACAAAGACTATGTTGTTCCTGAACATCAAGACATGCTAAGCACTTCCAAATGTTCATTTGTATCAGGCCTTTTTCCTCCACTTTCTGAGGAGACAGCCAAATCTGCAAAGTTTTCTTCTATTGGTTCTCGTTTTAAGCTACAATTACAACAACTGATGGAGACGCTCAATCTGACAGAGCCTCACTATATTAGATGTGTGAAGCCTAATAATCTATTAAAACCTGGCATATTTGAGAATATGAACATCATCCAACAATTACGTTCTGGTGGTGTTCTTGAAGCTGTAAGAATTAAATGTGCTGGATTCCCCACTCACAGAACATTTCATGATTTTTTAACTCGATTAGGCATTCTTGCACCTGAGGTTATTCGAGGAAACTTTGAAGAAAAGGATAAATGTAAAATGCTTTTGGAGAAGATTGGGCTGACAGGTTATCAGATAGGGGAAACACAAATATTTCTAAGAGCTGGTCAGATGGCTGAATTGGATGCTCGGAGGGCACGCGTACTTAGCAAGTCTGCAACTATTATCCAGAAGCAGAGTAGAACTCATTTTAGTCGAAAAACATATATTGCATTGCGAAAGTCCTCTGTCACGGTGCAGTCCTTTTGCAGAGGAGAATTGGCCCGGATATCATATTATCACATGAAGAGGGAAGCAGCTGCAATCAGAATTCAGATGTACACGCGTGGAAAATTAGCCAGAAAATGGTACACTGAAATAAGGATTTCTGCCATTGTCTTGCAGACAGGTTTTCGGGTAATGGCTGATTGCTATAAATTGAGATATAGAAAGCAAAGTAAAGCTTCAACTCATATTCAGTCTTACTGGCGTAGACATAAAGCTCTCGTTGAATATCAGGACCTTAAAAAGGTGTCAATCATTCCACAAAGCGTCAACCATCCCACGGATGAACATGAACATGAACATGAACATGAACATGAATATGAACATGAACATGAACATGAACATAAGGTTTTGGAGATATCAGTAGAAAATGAAAGTCCTTGTGTGGAAGAATCTTCAAATTCTTCCAAAGAAGAATCCTCAAGTCCTTTTCAAGATAATGAAAGCATTGAAGCGATCAGGGATTCCTCTAGTCCTTTGGGAGACACTGAAAAGTATGAGGCTCTCACTGCAGAAATAAAAAACTTGAAGGTCATGTTGCAGGAGGAAAAACAAAAAGCTGATGAATATGAAAGGAAATACGTAGAAGCTCAAGAATCAAGCGAAGAGTTACGGAAAAAATTAGCAGAAACTGAAAAAAGAGTATATCAGCTTCAGGACTCATTAAACAGTGTGTATCAGGATGATATCTTCCATGTCAAGTCAAGTTGCCGAGCTGAAGATGATCTTAAGCACTTCTTCAAGATTGAGTTCAACTTTTCGACCTATTGCTAG | 3102 | 0.3933 | MMQGILENVVAGSHVWVGDPELVWIDGQVLNINGEEAEIQTSNEKKVVSRLSKLHPKDTDAPTDGVDDMTKLAYLHEPGVLHNLETRYKINEIYTYTGNILIAINPFQSLPHLYDVNVMKSYKGAVVGDLSPHVFAIAEAAYRAMITEEKSNSILVSGESGAGKTETTKMLMCYLAFLGGHTASEGRTVEKQVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFNKYGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEDKEKYKLGDPRSFHYLNQSSCYELAGVNAAQEYLSTKRAMDIVGISQEEQDAIFRVVAAILHLGNIKFAKSEDSDSSVLEDEESIFRLQTTAELLMCEPDALEVALCKRVMITPEEIIKRSLDPIGATVSRDGLAKTLYSRLFDWIVNKINNSIGQDPSSKYLIGVLDIYGFESFRTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKERIDWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKDHKRFIKPKLARSDFTIVHYAGEVQYQSEQFIDKNKDYVVPEHQDMLSTSKCSFVSGLFPPLSEETAKSAKFSSIGSRFKLQLQQLMETLNLTEPHYIRCVKPNNLLKPGIFENMNIIQQLRSGGVLEAVRIKCAGFPTHRTFHDFLTRLGILAPEVIRGNFEEKDKCKMLLEKIGLTGYQIGETQIFLRAGQMAELDARRARVLSKSATIIQKQSRTHFSRKTYIALRKSSVTVQSFCRGELARISYYHMKREAAAIRIQMYTRGKLARKWYTEIRISAIVLQTGFRVMADCYKLRYRKQSKASTHIQSYWRRHKALVEYQDLKKVSIIPQSVNHPTDEHEHEHEHEHEYEHEHEHEHKVLEISVENESPCVEESSNSSKEESSSPFQDNESIEAIRDSSSPLGDTEKYEALTAEIKNLKVMLQEEKQKADEYERKYVEAQESSEELRKKLAETEKRVYQLQDSLNSVYQDDIFHVKSSCRAEDDLKHFFKIEFNFSTYC* | 1034 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja5g1880 | 1033 | ProSiteProfiles | IQ motif profile. | 760 | 789 | IPR000048 | GO:0005515 | |
Lja5g1880 | 1033 | Pfam | IQ calmodulin-binding motif | 787 | 805 | IPR000048 | GO:0005515 | |
Lja5g1880 | 1033 | Pfam | IQ calmodulin-binding motif | 761 | 780 | IPR000048 | GO:0005515 | |
Lja5g1880 | 1033 | Pfam | IQ calmodulin-binding motif | 739 | 757 | IPR000048 | GO:0005515 | |
Lja5g1880 | 1033 | Pfam | IQ calmodulin-binding motif | 835 | 853 | IPR000048 | GO:0005515 | |
Lja5g1880 | 1033 | Gene3D | - | 669 | 732 | - | - | |
Lja5g1880 | 1033 | ProSiteProfiles | Myosin motor domain profile. | 64 | 734 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Lja5g1880 | 1033 | SMART | iq_5 | 832 | 854 | IPR000048 | GO:0005515 | |
Lja5g1880 | 1033 | SMART | iq_5 | 784 | 806 | IPR000048 | GO:0005515 | |
Lja5g1880 | 1033 | SMART | iq_5 | 759 | 781 | IPR000048 | GO:0005515 | |
Lja5g1880 | 1033 | SMART | iq_5 | 736 | 758 | IPR000048 | GO:0005515 | |
Lja5g1880 | 1033 | PRINTS | Myosin heavy chain signature | 94 | 113 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Lja5g1880 | 1033 | PRINTS | Myosin heavy chain signature | 198 | 225 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Lja5g1880 | 1033 | PRINTS | Myosin heavy chain signature | 431 | 459 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Lja5g1880 | 1033 | PRINTS | Myosin heavy chain signature | 484 | 512 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Lja5g1880 | 1033 | PRINTS | Myosin heavy chain signature | 151 | 176 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Lja5g1880 | 1033 | MobiDBLite | consensus disorder prediction | 902 | 932 | - | - | |
Lja5g1880 | 1033 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 40 | 788 | IPR027417 | - | |
Lja5g1880 | 1033 | MobiDBLite | consensus disorder prediction | 866 | 938 | - | - | |
Lja5g1880 | 1033 | MobiDBLite | consensus disorder prediction | 868 | 897 | - | - | |
Lja5g1880 | 1033 | PANTHER | MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN | 8 | 1026 | - | - | |
Lja5g1880 | 1033 | SMART | MYSc_2a | 58 | 735 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Lja5g1880 | 1033 | Gene3D | - | 441 | 625 | - | - | |
Lja5g1880 | 1033 | CDD | MYSc_Myo11 | 78 | 722 | IPR036018 | - | |
Lja5g1880 | 1033 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 314 | 603 | - | - | |
Lja5g1880 | 1033 | ProSiteProfiles | IQ motif profile. | 737 | 766 | IPR000048 | GO:0005515 | |
Lja5g1880 | 1033 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 10 | 59 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Lja5g1880 | 1033 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 788 | 861 | IPR027417 | - | |
Lja5g1880 | 1033 | Gene3D | - | 736 | 786 | - | - | |
Lja5g1880 | 1033 | Gene3D | - | 787 | 835 | - | - | |
Lja5g1880 | 1033 | ProSiteProfiles | IQ motif profile. | 833 | 858 | IPR000048 | GO:0005515 | |
Lja5g1880 | 1033 | Pfam | Myosin head (motor domain) | 66 | 722 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Lja5g1880 | 1033 | ProSiteProfiles | IQ motif profile. | 785 | 809 | IPR000048 | GO:0005515 | |
Lja5g1880 | 1033 | Pfam | Myosin N-terminal SH3-like domain | 11 | 48 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Lja5g1880 | 1033 | Gene3D | Kinesin motor domain | 67 | 664 | IPR036961 | - | |
Lja5g1880 | 1033 | Coils | Coil | 942 | 997 | - | - | |
Lja5g1880 | 1033 | Gene3D | - | 254 | 312 | - | - | |
Lja5g1880 | 1033 | PANTHER | MYOSIN | 8 | 1026 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja5g1880 | Lja-Chr5 | 22698776 | 22713773 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja5g1880 | 4 | 1001 | Myosins gene family | AT1G54560 | 63.214 | 0.0 | 1375 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja5g1880 | K10357 | - | gmx:100803485 | 1694.09 |