Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1860 ATGGCCAAGGAGCAAATTCAGGTGCTAAATGCACTAGATGTGGCCAAAACACAATGGTATCACTTCACAGCAATCATCATTGCTGGAATGGGCTTCTTCACTGATGCCTATGACCTGTTCTGCATATCGCTCGTTACGAAGCTTCTTGGTCGTATATATTACCATGTTGATGGTGCAGAGAAGCCTGGCACACTGCCTCCCAATGTGTCAGCTGCTGTTAATGGTGTTGCTTTCATAGGAACACTTTCTGGGCAACTCTTCTTTGGCTGGCTCGGTGACAAAATGGGCCGTAAAAAAGTCTATGGCATGACCCTGATGCTGATGGTGGTAGCCTCCATCGCTTCCGGTCTTTCTTTTGGACACGATCCAAAGACCGTGATGACAACTCTTTGCTTCTTCCGATTCTGGCTTGGTTTTGGTATTGGTGGAGACTACCCACTTTCGGCTACCATAATGTCTGAGTATTCTAATAAGAAGACCCGTGGTGCCTTCATAGCTGCAGTGTTTGCAATGCAGGGTTTTGGAATTTTAGCAGGAGGTATATTTGCAATCATAATTGCTTCTGCATTCAAGGCCAAGTTTGATGCTCCAGCATACGAGGTTGATCCATTAGGCTCAACTGTTCCACAAGCAGACTATGTTTGGAGGATAATTCTAATGGTAGGAGCAATCCCAGCTGCAATGACTTACTACTCGAGAACGAAGATGCCAGAAACCGCACGTTATACCGCCCTGGTTGCAAAGAACACGGAGAAGGCTGCAGCAGATATGTCTAAGGTCTTGCATGTGGAGATTCAAGCTGAACCAAAAAAGGAGGTGACACAGCAACAAAGTAACTCATTTGGATTGTTCTCTAAGGAGTTCCTCAGGCGCCATGGACTGCATCTACTCGGAACAACCAGCACATGGTTTTTGCTTGATATTGCATTTTACAGCCAAAATCTCTTCCAGAAGGACATCTTCAGCGCAATCGGTTGGATCCCTTCTGCAAAGACCATGAATGCCCTTGAAGAGGTTTACAGAATTGCAAGGGCTCAAACTCTTATTGCTCTTTGCAGCACAGTTCCGGGTTACTGGTTCACCGTGGCATTCATTGACAGGATTGGAAGATTTGCTATTCAGTTGATGGGGTTCTTCTTCATGACAGTGTTCATGTTTGCTCTTGCCATTCCCTATGAACACTGGACTCACAAGGAGAACAGAATTGGGTTTGTGGTGATGTATTCGTTGACCTTCTTCTTTGCAAACTTTGGGCCTAATGCTACCACATTTGTTGTGCCAGCAGAGATCTTCCCAGCTAGATTGCGATCCACTTGCCACGGAATATCATCAGCATGCGGGAAGCTTGGAGCTATGGTTGGTGCATTTGGATTCTTGTACTTGGCTCAAAACCAGGACAAGAGCAAAGCAGATGCAGGGTACCCTGCTGGTATTGGTGTGAAGAATTCACTGCTTCTATTAGGTGTTGTGAACATTCTGGGCTTCCTCTTTACTTTCTTGGTCCCAGAAGCAAAGGGAAAATCTCTGGAGGAGATGTCTGGTGAGCAAGAAGAGGAAGTTGAAAGTTAA 1569 0.457 MAKEQIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGTLPPNVSAAVNGVAFIGTLSGQLFFGWLGDKMGRKKVYGMTLMLMVVASIASGLSFGHDPKTVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIIASAFKAKFDAPAYEVDPLGSTVPQADYVWRIILMVGAIPAAMTYYSRTKMPETARYTALVAKNTEKAAADMSKVLHVEIQAEPKKEVTQQQSNSFGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPSAKTMNALEEVYRIARAQTLIALCSTVPGYWFTVAFIDRIGRFAIQLMGFFFMTVFMFALAIPYEHWTHKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISSACGKLGAMVGAFGFLYLAQNQDKSKADAGYPAGIGVKNSLLLLGVVNILGFLFTFLVPEAKGKSLEEMSGEQEEEVES* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1860 522 Pfam Sugar (and other) transporter 26 513 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja5g1860 522 TIGRFAM 2A0109: phosphate:H+ symporter 11 515 IPR004738 GO:0005315|GO:0006817|GO:0016021
Lja5g1860 522 CDD MFS_PhT 25 505 - -
Lja5g1860 522 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 506 IPR020846 GO:0022857
Lja5g1860 522 Gene3D MFS general substrate transporter like domains 20 522 IPR036259 -
Lja5g1860 522 SUPERFAMILY MFS general substrate transporter 12 513 IPR036259 -
Lja5g1860 522 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 520 - -
Lja5g1860 522 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 1 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1860 Lja-Chr5 22117570 22119466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1860 1 521 Inorganic Solute Cotransporters AT3G54700 85.413 0.0 935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1860 K08176 - gmx:100786638 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1860 5 22117570 22119466 Lja5g1860 5 22117570 22119466 ECH
Lja5g1860 5 22117570 22119466 Lja1g1039 1 10327555 10330593 PCT