Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1830 ATGGAGCAGAAAAGATTTTCTCTTGTCCATGTATCCAGGGAATTCATGCCACACCTGATAATGGTGTTAGCCCAGGTGGGTTACACCCTCTTGAATTTTGTTAGTGAAGCCTCCTTCAATCATGGGATGAGTCCCTATGTGTATGTAACCTATCGGCATGTTGTAGCTGGGGTTGTCATGTTGCCTTTCGCATACTTTCTAGAGAGGAAATTAAGGCCAAAGCTGACATTTGCTCTCGTGATGGAAATTTTTGTGCTTTCACTGTTAGGGAGTATGTCTCTCAACATGTACTTTGCAAGCATGAAGTACACATCTCCGGCCTTTGTTACAGCCATGATCAACACCATAACTCCACTTACCTTCCTTATTGCAGTGGCACTCAGGTTTGAGTTTGTTGATATTGTACACCCTCGAGGTGTAGCAAAAGTTCTTGGGACCTTGATTTCCCTTGCTGGTGTAATGATCATGACACTATACAAGGGACCAATCATGAGAAATTTATGGCATCCTCTTATCCACGTTGAAGGAAAAAGTGCTGATATCAACAAAAGCTGGTTAAAGGGTTCCCTCCTTGCATTTTCATGCAGTGTTACATGGTCTATATGGTACATCATGCAGGCATCAACATTGAAAAGATACCCTGCCCAACTATCACTCACTACATGGATGTGCTTTCTTGGAGCAGCACAATCAGCTGTTTTGACAGTGATAGCAGAAAACAACTCTTCAGAATGGGTGATCGGGTTCAACATTGACTTGTGGTCCATAATATATGGAGGAGTTGTGGCTTCAGGTTTGTTGATATACATTCAACTGTGGGTTACTGAGAAAAGAGGGCCAGTGTTTGTCACTGTGTTCAACCCTCTTTGTGCAATATTTGTGGCAGTCGTAGCATACTTTATCCTTGCTGAGAAGCTTTATTTGGGCAGCATCATAGGTGCATCTATTATCATCATTGGCATGTACTTGCTGTTGTGGGGCAAAGAAGGTGACCAAGAGGTTCATATCAGAACCAAAGGCGAACCACAGTATGAAGACCCAGAATGCAGAACACAGTCATTAACTTTAGCAGGAAACTAA 1080 0.4269 MEQKRFSLVHVSREFMPHLIMVLAQVGYTLLNFVSEASFNHGMSPYVYVTYRHVVAGVVMLPFAYFLERKLRPKLTFALVMEIFVLSLLGSMSLNMYFASMKYTSPAFVTAMINTITPLTFLIAVALRFEFVDIVHPRGVAKVLGTLISLAGVMIMTLYKGPIMRNLWHPLIHVEGKSADINKSWLKGSLLAFSCSVTWSIWYIMQASTLKRYPAQLSLTTWMCFLGAAQSAVLTVIAENNSSEWVIGFNIDLWSIIYGGVVASGLLIYIQLWVTEKRGPVFVTVFNPLCAIFVAVVAYFILAEKLYLGSIIGASIIIIGMYLLLWGKEGDQEVHIRTKGEPQYEDPECRTQSLTLAGN* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1830 359 PANTHER WAT1-RELATED PROTEIN 15 345 IPR030184 GO:0016021|GO:0022857
Lja5g1830 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 160 - -
Lja5g1830 359 PANTHER WAT1-RELATED PROTEIN 15 345 - -
Lja5g1830 359 Pfam EamA-like transporter family 21 157 IPR000620 GO:0016020|GO:0016021
Lja5g1830 359 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Lja5g1830 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1830 Lja-Chr5 21503446 21507067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1830 17 336 Nodulin-like Gene Family AT5G07050 42.900 1.61e-93 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1830 - - lja:Lj5g3v1145280.1 647.121