Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1817 ATGGCGAGAGAGGGAACAATAGGAGTGCTTAATGCACTTGATGTGGCCAAGACACAATGGTACCACTTCACTGCAATTGTGATTGCTGGAATGGGATTTTTCACTGATGCATATGATCTCTTTTGCATTTCCCTTGTCACCAAGTTACTGGGGAGGATATACTACACTGACATAACCAAATCAAGGCCTGGTGTTCTTCCAGCTAATGTGCAAGCCGCTGTGACTGGTGTCGCGCTTTGCGGTACCTTAGCCGGCCAGCTTTTCTTCGGTTGGCTCGGTGACAAGATGGGAAGGAAAAGGGTTTATGGCTTAACTCTCATGATCATGGTAGTGTGCTCCATTGCTTCAGGGCTCTCCTTTGGTAATAGCCCAAAAAGCGTCATGGCCACGCTTTGTTTCTTCAGGTTCTGGCTTGGTTTCGGGATTGGTGGCGACTACCCTCTTTCGGCCACAATCATGTCCGAATACGCGAACAAAAAGACGCGAGGCGCGTTCATTGCTGCGGTGTTTGCTATGCAAGGGTTCGGAATCTTGGGTGGTGGAATAGTGGCTTTGATCGTCTCGGCCTCGTTTGACCACAAATACAATGTTCCTAGTTATCAAGAAGACCCGGCAGCATCAATGGTGTTGCCGGCTTTTGACTATGTTTGGCGTATCATTCTCATGTTTGGTGCGCTCCCAGCGGCCCTGACCTACTACTGGCGTATGAAAATGCCTGAGACAGCTCGTTACACAGCCTTGGTTGCCAAGAATGCGAAACAAGCTGCCTCAGACATGTCCAAGGTGCTGCAAGTTGAACTTGAAGCCGAAGAGGAAAAGGTGGAGAAAATTCTTGAGAGTGAAAACCAACAATTTGGCTTGTTCAGCAAGCAATTCGCCTCGCGCCACGGGATGCACTTGCTAGGAACCACAACTACTTGGTTCTTGTTGGACATTGCCTTCTACAGCCAGAACCTCTTCCAAAAGGACATTTTCAGCGCGATCGGATGGATCCCTCCAGCAAAAGAAATGAATGCAATCCATGAGGTTTACAAGATTGCAAGAGCACAAACACTTATAGCACTATGCAGTACAGTTCCCGGTTACTGGTTTACCGTGGCCTTTATCGATTACATGGGCCGTTTCGCGATCCAATTGATGGGATTCTTCTTCATGACGGTCTTCATGTTTGCTCTGGCCTTACCTTATGATCACTGGACTAAGAAAGATAACCGATTTGGGTTCGTCGCCATGTACGCCCTCACGTTCTTCTTCGCGAATTTCGGTCCAAACGCCACCACATTTGTGGTGCCGGCCGAGATTTTCCCTGCAAGGCTGAGGTCCACTTGTCATGGAATCTCAGCTGCTGCAGGAAAAGCAGGAGCAATAGTAGGTGCATTTGGGTTCTTGTATGCTTCTCAGAGTAAAGATCCTGCTAAGACTGATCCAGGTTACCCAACTGGTATTGGGGTGAGGAACTCTCTCATTATGCTTGGTGTGATCAATTTCTTGGGGATGGTATTCACCTTTTTGGTGCCGGAATCAAAGGGGAAGTCACTGGAAGAGTTGAGTGGGGAGACAGAAGAAGATGGCGTTGAGGCTATTGAGGCTGCAGGGTCTAGGACAGTTCCAGTTTAA 1617 0.4836 MAREGTIGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDITKSRPGVLPANVQAAVTGVALCGTLAGQLFFGWLGDKMGRKRVYGLTLMIMVVCSIASGLSFGNSPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILGGGIVALIVSASFDHKYNVPSYQEDPAASMVLPAFDYVWRIILMFGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEEKVEKILESENQQFGLFSKQFASRHGMHLLGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKEMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALALPYDHWTKKDNRFGFVAMYALTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYASQSKDPAKTDPGYPTGIGVRNSLIMLGVINFLGMVFTFLVPESKGKSLEELSGETEEDGVEAIEAAGSRTVPV* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1817 538 CDD MFS_PhT 26 509 - -
Lja5g1817 538 Pfam Sugar (and other) transporter 26 516 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja5g1817 538 Gene3D MFS general substrate transporter like domains 21 268 IPR036259 -
Lja5g1817 538 Gene3D MFS general substrate transporter like domains 273 532 IPR036259 -
Lja5g1817 538 TIGRFAM 2A0109: phosphate:H+ symporter 12 519 IPR004738 GO:0005315|GO:0006817|GO:0016021
Lja5g1817 538 Coils Coil 253 284 - -
Lja5g1817 538 SUPERFAMILY MFS general substrate transporter 13 517 IPR036259 -
Lja5g1817 538 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 6 531 - -
Lja5g1817 538 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 531 - -
Lja5g1817 538 ProSiteProfiles Major facilitator superfamily (MFS) profile. 25 510 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1817 Lja-Chr5 21137289 21141088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1817 1 538 Inorganic Solute Cotransporters AT2G38940 78.067 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1817 K08176 - gmx:100792177 914.835