Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1816 ATGGCTAAGGAACAATTGAATGTGCTGAATGCACTTGATGTTGCCAAGACACAATGGTACCACTTCACTGCAATTGTGATTGCAGGCATGGGTTTCTTCACTGATTCCTATGATCTCTTCTGCATCTCCCTTGTCACCAAGCTACTGGGACGAATATACTACTTTGATAACCCCACAAAACCCGGTTCTCTGCCAACAAATGTCTCTGCTGCCATCAATGGCGTCGCGTTCTGCGGAACCCTCGCGGGCCAGCTTTTCTTCGGCTGGCTCGGGGACAAAATGGGAAGGAAAAGGGTCTATGGGATGACCCTTGTGCTCATGGTGTTTTGTTCACTTGCTTCTGGACTTTCCTTTGGGAAGGATCCTAAAGCTGTTATAGCTACACTCTGCTTCTTCAGGTTCTGGCTTGGATTTGGAATTGGTGGTGACTACCCTCTTTCAGCTACTATCATGTCTGAGTATGCCAACAAGAAGACTCGTGGAGCTTTCATTGCTGCAGTTTTTGCTATGCAAGGGTTTGGAATTTTGACTGGTGGCATGGTTGCAATTATAGTTTCTGCTGCCTTCAATGCCAGGTATCCTGCTCCAGCATTCAAAGTTAACCCAGTCTTGTCCACAGTGCCAGAAGCTGACTATGTATGGAGGATCATCTTGATGTTTGGTGCACTTCCAGCTCTGCTCACATACTATTGGAGGATGAAAATGCCTGAAACTGCAAGGTACACTGCCTTGGTTGCCAAGAATGCAAAGCAAGCAGCTGCAGACATGTCAAAAGTGCTGCAGGTTGAGATAGAACCAGAACCAGAGAAGATTCAGAAATTGGAAGCACAACAAGGGAATAAGTTTGGCTTGTTCTCAAACCAGTTCCTCCGCCGCCATGGACTTCACCTTGCTGGAACTGCTGTTACTTGGTTTCTTCTGGACATTGCTTATTACAGTCAGAATCTTTTCCAAAAGGACATTTTCACTGCAATTGGGTGGCTACCAGATGCAAAAACCATGAATGCAATTGAAGAGGTTTACAAGATTGCAAGAGCTCAAACTTTGATAGCACTTTGCAGCACTGTCCCTGGTTACTGGTTCACAGTGGCACTCATTGATAGGATTGGAAGGATTAAAATTCAGTTGATCGGGTTTTTCTTCATGACTGTGTTCATGTTTGGTTTAGCCATTCCTTACCACCACTGGACCATGAAGGGAAACCAAATTGGGTTTATTGTGATGTACTCACTGACCTTCTTCTTCGCCAATTTCGGCCCTAACGCCACCACATTTATCGTGCCAGCGGAGATTTTCCCGGCAAGGCTGAGATCAACATGCCATGGCATATCAGCTGCTGCTGGGAAAGCTGGAGCAATGGTTGGTTCTTTTGGGTTCCTGTATGCTCAAAATGCCATTGGACTGAGAAATGTGCTTATACTTTTGGGTGTTGCTAACCTCTTGGGTTTGTTTTTCACATTCTTGGTGCCTGAACCTAATGGGAAATCACTTGAGGAGATTTCTGGTGAAGCTGAGGAAGAAGAGACTGCTGCTACAAGAGACCCAGCATTGTGGCATGGAATTCAAGTTTAG 1572 0.4561 MAKEQLNVLNALDVAKTQWYHFTAIVIAGMGFFTDSYDLFCISLVTKLLGRIYYFDNPTKPGSLPTNVSAAINGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLVLMVFCSLASGLSFGKDPKAVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILTGGMVAIIVSAAFNARYPAPAFKVNPVLSTVPEADYVWRIILMFGALPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVEIEPEPEKIQKLEAQQGNKFGLFSNQFLRRHGLHLAGTAVTWFLLDIAYYSQNLFQKDIFTAIGWLPDAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDRIGRIKIQLIGFFFMTVFMFGLAIPYHHWTMKGNQIGFIVMYSLTFFFANFGPNATTFIVPAEIFPARLRSTCHGISAAAGKAGAMVGSFGFLYAQNAIGLRNVLILLGVANLLGLFFTFLVPEPNGKSLEEISGEAEEEETAATRDPALWHGIQV* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1816 523 TIGRFAM 2A0109: phosphate:H+ symporter 11 503 IPR004738 GO:0005315|GO:0006817|GO:0016021
Lja5g1816 523 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 494 IPR020846 GO:0022857
Lja5g1816 523 CDD MFS_PhT 25 492 - -
Lja5g1816 523 SUPERFAMILY MFS general substrate transporter 12 501 IPR036259 -
Lja5g1816 523 Gene3D MFS general substrate transporter like domains 272 516 IPR036259 -
Lja5g1816 523 Gene3D MFS general substrate transporter like domains 20 265 IPR036259 -
Lja5g1816 523 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 4 514 - -
Lja5g1816 523 Pfam Sugar (and other) transporter 25 501 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja5g1816 523 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 4 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1816 Lja-Chr5 21118515 21120421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1816 1 502 Inorganic Solute Cotransporters AT2G38940 76.163 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1816 K08176 - gmx:100802365 911.753