Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1781 ATGGCTCCAACACCATCTTCCAAATCAAACCATTTCACCATGTTGAAGACTCCACAGTCCAAGCATCGGTTGAACTTCAATGGCGTCAAAGCTCCACTTTCACACCCATCTCCCAATCACAACCCTAACCCTAATTCTGGTCCTCATGAACACCCCATTGAGGTTATTGCGAGAATCCGTGACTACCCAGATCGGAAAGATAAGCCATTACCGGTTCTTCAGACGAATTCCCAATCGAGGTCGATTAGGGTTCGTGCGGATTTTGGGTATCGGGATTTTACTCTTGATGGGGTTTCAGTGTCGGAGGAAGAGGATTTAGATTCGTTTTATAAGAAATTTGTGGAGTCAAGGATCAGTGGGGTTAAGCTGGGGGAGAAATGTACTATCATGATGTATGGGCCAACTGGGTCTGGGAAGAGTCATACTATGTTCGGGTGTTCGAAGCAGGCGGGGATTGTGTATCGGTCGTTGAGGGATATTCTTGGAGACGGGGATTCGGATGGTGATGGAGATGGTGAGTCTAAAGGGTTTAGTCTTGGTGTGGGGACTTTTGTTCAGGTTACTGTTTTGGAGATTTATAATGAGGAGATTTATGATCTTTTGTCTACCAATGGAGGTGGTGGCGGTGGAGGATTTGGATTCGGGTGGCCTAAAGGCAGTGGTTCAAAGGTGAAACTTGAAGTGATGGGGAAAAAGGCAAAGAATGCAACCTATATATCTGGAAATGAAGCCGGGAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAACGAAGGATTGTTAAAAGCACGCTTTGTAATGACAGGAGTTCTAGAAGTCACTGCATGGTTATCCTTGATGTTCCAACTGTGGGAGGGAGGCTAATGCTTGTAGACATGGCAGGTTCAGAAAATATTGAACAAGCTGGTCAAAGTGGATTTGAGGCCAAAATGCAGACTGCAAAAATCAATCAAGGAAATACAGCACTGAAGAGAGTGGTCGAGTCCATTGCAAATGGTGATTCACATGTACCTTTTAGGGACAGCAAACTTACCATGCTTCTGCAGGATTCCTTTGAAGATGACAAGTCAAAAATTCTAATGATATTGTGTGCAAGTCCCGATCCTAAGGAGATACATAAGACAATCTCTACACTTGAATATGGAGCCAAAGCAAAATGTATAGTTCGTGGCCCTCATACACCCCCAGTCAAGGATGAGGATTCTTCTTCTGCTGTTATCATGGGGTCAAGAATTGCTGCAATGGATGAATTTATCATGAAGCTTCAAATGGAAAACAAGCTAAGAGAGAAAGAGCGGAATGAAGCGCACAAAAAGCTTATGAAGAAAGAGGAAGAAGTTGCTGCGCTAAGAGCTAAACTGGAAGTGACTGTAGGCAAAGGAATTCCTCCAAGTGAGGAGGAGATTAACCTCAAGGTAAATGAACGAACCCGGCTTCTGAGACAAGAGTTGGAAAAGAAGTTGGAAGAGTGCCAAAGAATGACTAATGAGTTTGTTGAATATGAGAGGAAGAGAATGGAAGAAAGGATATTGCAGCAGCAGGAGGAAGTTGAAATTCTGAGGAAGAGGCTGGAAGAAATCGAGTTGCAGCTATGTAGTTCTTCAAGGCGTACCGAGGAAAACGAACCAAAAGATGTGGAGTCAAGTGGGTTCGCAAGAAGGCTGATGCGTATTTACAAAAGTGAGGAGGATCCTGGAATGGTGAAATCAATGGATTTGGACATGGATGATCAAGAACCTGTTGCGCGTGAGGTGAACATTGTGGGTGGAGTTATGTGCAGGAGTGGTTACAATGTTGTGCAAGACTTCTCAAATCAACTTTGTCCAAACATTCTGAATGGTGCACAAGAAGATACTTATGCTTCTGCACCAAACTTTGGTCAAAGAGCAGGTCTCAGTACAGTGTATGAAGAAGAGGAGGAAGTAGAAGAAGAACAGGATCAAGAAGACAAAGGAGAAGAAGATGAGGAAGTGGAGAAAGAAGTCATAGAGGAAAAGAGGGTATGTTCTGTTGACAAGCCTAGTGCTGCTAGCCCTTTTGCAATTCATAGCAGAAGTCCAAAGAGAGAGGATCATAGTTTCAAGGGAAATTCAGTGGATGACAAGGAAAATGGATCTAGACTACTGAGAATTCAAAATATATTCACTCTTTGTGGGAACCAAAGAGAGCTGTCCCAGCACATTGGAACCCCAGTACCTTCAAAAAAGAGGTCTGATGAAACTCTTGATCTCAAGTTTTCTCCTGTGAAGGATTCTGTTTTGAAAGTCTCCAACAAGGAGAACATGGGACCTCATAATGTTGTGGGAAATTATTGTACAATATGTGATGAGCATGTGTTTCCTTCTGGAAATGTGTTGAGTTTCCTTCTGGAAATATGTTTTATTGAGTACACTATCTCAAACCTCAATATTGATACTATGTCTTTTTGA 2427 0.4277 MAPTPSSKSNHFTMLKTPQSKHRLNFNGVKAPLSHPSPNHNPNPNSGPHEHPIEVIARIRDYPDRKDKPLPVLQTNSQSRSIRVRADFGYRDFTLDGVSVSEEEDLDSFYKKFVESRISGVKLGEKCTIMMYGPTGSGKSHTMFGCSKQAGIVYRSLRDILGDGDSDGDGDGESKGFSLGVGTFVQVTVLEIYNEEIYDLLSTNGGGGGGGFGFGWPKGSGSKVKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQSGFEAKMQTAKINQGNTALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPPVKDEDSSSAVIMGSRIAAMDEFIMKLQMENKLREKERNEAHKKLMKKEEEVAALRAKLEVTVGKGIPPSEEEINLKVNERTRLLRQELEKKLEECQRMTNEFVEYERKRMEERILQQQEEVEILRKRLEEIELQLCSSSRRTEENEPKDVESSGFARRLMRIYKSEEDPGMVKSMDLDMDDQEPVAREVNIVGGVMCRSGYNVVQDFSNQLCPNILNGAQEDTYASAPNFGQRAGLSTVYEEEEEVEEEQDQEDKGEEDEEVEKEVIEEKRVCSVDKPSAASPFAIHSRSPKREDHSFKGNSVDDKENGSRLLRIQNIFTLCGNQRELSQHIGTPVPSKKRSDETLDLKFSPVKDSVLKVSNKENMGPHNVVGNYCTICDEHVFPSGNVLSFLLEICFIEYTISNLNIDTMSF* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1781 808 MobiDBLite consensus disorder prediction 673 700 - -
Lja5g1781 808 Gene3D Kinesin motor domain 32 390 IPR036961 -
Lja5g1781 808 PANTHER KINESIN-LIKE PROTEIN KIF22 19 736 - -
Lja5g1781 808 Coils Coil 425 452 - -
Lja5g1781 808 MobiDBLite consensus disorder prediction 631 661 - -
Lja5g1781 808 Pfam Kinesin motor domain 74 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1781 808 SMART kinesin_4 50 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1781 808 MobiDBLite consensus disorder prediction 1 24 - -
Lja5g1781 808 Coils Coil 634 654 - -
Lja5g1781 808 MobiDBLite consensus disorder prediction 1 51 - -
Lja5g1781 808 PRINTS Kinesin heavy chain signature 286 304 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1781 808 PRINTS Kinesin heavy chain signature 263 280 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1781 808 PRINTS Kinesin heavy chain signature 336 357 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1781 808 PRINTS Kinesin heavy chain signature 124 145 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1781 808 MobiDBLite consensus disorder prediction 636 659 - -
Lja5g1781 808 MobiDBLite consensus disorder prediction 683 700 - -
Lja5g1781 808 PANTHER KINESIN-RELATED 19 736 IPR027640 GO:0003777|GO:0007018
Lja5g1781 808 Coils Coil 473 529 - -
Lja5g1781 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 394 IPR027417 -
Lja5g1781 808 ProSiteProfiles Kinesin motor domain profile. 52 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1781 Lja-Chr5 20485534 20489009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1781 101 391 Calmodulin-binding Proteins AT5G65930 27.961 1.10e-26 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1781 - K10398 gmx:100779567 1117.45