Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1768 ATGGATCATGTTATTGGTGGAAAATTCAAGCTTGGTAGGAAAATTGGGAGTGGTTCGTTTGGACAGCTTTACTTGGGTGTTAATGTACAAAGTGGAGATGAAGTGGCTGTCAAGCTGGAGCCTGTGAAGACCAAGCATCCTCAACTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGGGGTACTGGGGTACCCCATATTAAATGGTATGGAGTTGAGGGCGACTACAATGTCATGGTTATTGACCTTCTTGGACCAAGTCTTGAAGACTTATTTAACTATTGCAATAGGAAATTCTCTCTGAAAACAGTTCTGATGCTAGCTGATCAGCTAATAAACAGAGTTGAGTACATGCACTCCCGGGGCTTTCTGCACCGTGATATAAAGCCTGATAACTTCTTAATGGGTTTAGGACGTAAGGCAAATCAGGTTTATGTAATTGATTTTGGCCTTGCGAAAAAGTATCGGGATCTTCAAACCCACAAGCATATACCATATAGGGAAAACAAAAACCTCACTGGAACAGCTCGGTATGCAAGTGTTAATACTCATTTGGGAGTTGAACAAAGCAGGAGAGATGATCTAGAATCACTTGGTTATGTGCTCATGTACTTTTTGAGAGGAAGTCTCCCTTGGCAAGGCTTGAAAGCTGGCACTAAGAAGCAAAAATATGACAAGATAAGTGAAAAGAAGATGCTTACACCAATAGAGGTCTTATGCAAGTCATATCCATTGGAATTCACATCATACTTCCACTACTGCCGATCATTGCGGTTTGAAGATAAGCCTGATTATTCATATCTTAAAAGACTCTTCAGGGACTTATTCATCCGAGAAGGCTATCAGTTTGACTATGTATTTGATTGGACTATATTGAAGTATCCACAAATTGGATCTAGTTCTAAGGCTCGGCCCAGTGAGAAAGCAGTCATAAACCCAGGAACATCAGCAGAGAGAAAAGAACGGCCTTCAGGTGGGCAAGAGATTCGGGATCGATTCTCAGGAGCAGTTGAGGCATTTGCAAGGAGGAATAGCTCTGGGCTTGGTCTGCATAGTGATCCTTCTAGGCATAGGTCCTTAGTTGATTTGCCATCTTCCAAAGACGTGCAAGCTGATTCTGAGAGGCCCCGTAGCTCTTCCCGCAACGGCAGTTCATCCCGTAACGGAAGTTCTTCAAAAAGGCCGGTTCAATCCAGCAGCCGACCAAGTTCTTCTGGTGAACCTAGTGAAAACCGTTCCAGTAGACTGGTCTCAAGCGGTAGCCGACTTTCTTCAACTCAGAGGACTCAACCTGGTTTTGAGTCCAAAACATCTTTCACTCGCGCGTCAGGGACACGGGGTGGTCGTGATGATACACTCAGGAGCTTTGAACTCCTGTCAATTGGCACAGGAACAGGAAAAAGGAAATGA 1413 0.4374 MDHVIGGKFKLGRKIGSGSFGQLYLGVNVQSGDEVAVKLEPVKTKHPQLHYESKLYMLLQGGTGVPHIKWYGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYVIDFGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSYPLEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSKARPSEKAVINPGTSAERKERPSGGQEIRDRFSGAVEAFARRNSSGLGLHSDPSRHRSLVDLPSSKDVQADSERPRSSSRNGSSSRNGSSSKRPVQSSSRPSSSGEPSENRSSRLVSSGSRLSSTQRTQPGFESKTSFTRASGTRGGRDDTLRSFELLSIGTGTGKRK* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1768 470 MobiDBLite consensus disorder prediction 300 330 - -
Lja5g1768 470 Gene3D Transferase(Phosphotransferase) domain 1 1 334 - -
Lja5g1768 470 PANTHER CASEIN KINASE-RELATED 1 456 - -
Lja5g1768 470 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g1768 470 MobiDBLite consensus disorder prediction 356 376 - -
Lja5g1768 470 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Lja5g1768 470 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g1768 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Lja5g1768 470 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 456 - -
Lja5g1768 470 MobiDBLite consensus disorder prediction 346 470 - -
Lja5g1768 470 SMART serkin_6 9 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g1768 470 MobiDBLite consensus disorder prediction 377 446 - -
Lja5g1768 470 CDD STKc_CK1_delta_epsilon 8 282 - -
Lja5g1768 470 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1768 Lja-Chr5 20043199 20049660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1768 8 213 MAP Kinase Kinase Kinase AT3G06030 25.926 1.94e-14 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lja5g1768 Pkinase 7.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1768 K08960 - jre:108991207 780.4