Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1753 ATGGCTCGGGATGGGAGCGTTCTCCCTGCGGACCCTCAGGCTGTGGCTGTGGTGAAGAAGAAGACACAATCTTCGAGAAGTTGGATTCTGTTTGATGCTGATGGCCAAGGCTCGTTGCTTGATGTGGACAAGTATGCTATAATGCACCGGGTTCAGATTCACGCACGTGATCTTAGAATCCTTGATCCCTTGCTCTCTTACCCCTCTACCATTCTGGGTCGTGAGAAGGCCATTGTTCTTAACTTGGAGCATATTAAGGCAATTATTACTGCTGAAGAGGTTTTGCTGCGAGATCCAACAGATGAAAATGTTGTCCCGGTTGTTGAGGAACTGCAAAGGCGGTTGCCTAAAGTAAGCTCCCTTCATCAACAGCAAGGAGATGGTCAAGAGTATGTTAGTAGTCAACATGATACTGAAGCAGCTGAAGAAGATGAGTCACCCTTTGAATTCCGGGCCTTAGAGGTGGCTTTAGAAGCCATTTGTAGTTTCCTTGCTGCACGCACAACAGAATTGGAGATGGCTGCCTATCCTGCATTAGATGAACTTACCTCCAAGATTAGTAGTCGTAATTTGGACAGAGTTCGTAAACTGAAGAGTGCCATGACAAGGCTGACTGCTAGGGTTCAAAAGGTCAGAGATGAGCTTGAACAACTTCTGGATGATGATGATGATATGGCTGACCTTTACTTGTCAAGAAAGGCTGGTTCATCATCACCAGTTAGTGGATCAGGTGCTGCTAATTGGTTTGGTGGCTCCCCCACCATTGGATCAAAGATATCAAGAGCAAGTAGAGCAAGTTTAGCAACAGTTCGTTTTGATGAAAATGATGTGGAAGAGCTTGAAATGTTACTTGAGGCTTATTTCATGCAAATTGATGGCACATTTAACAAGTTAACCACTCTGCGAGAATATATTGATGATACTGAAGATTATATTAATATTCAACTTGACAACCATCGTAATCAGCTGATTCAGTTAGAGCTATTTCTTAGCTCTGGAACCGTTTGCCTATCTTTCTACTCCTTGGTGGCTGCTATTTTCGGCATGAATATCCCATATAGTTGGAATGATAACCATGGTTTCATGTTCAAATGGGTAGTTATCGTCTCAGGAGTATTTTCTGCTATCATGTTTCTCTTGATTATTGTCTATGCTCGCAAAAAGGGGTTGGTCGGATCATGA 1182 0.4332 MARDGSVLPADPQAVAVVKKKTQSSRSWILFDADGQGSLLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDENVVPVVEELQRRLPKVSSLHQQQGDGQEYVSSQHDTEAAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKAGSSSPVSGSGAANWFGGSPTIGSKISRASRASLATVRFDENDVEELEMLLEAYFMQIDGTFNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSFYSLVAAIFGMNIPYSWNDNHGFMFKWVVIVSGVFSAIMFLLIIVYARKKGLVGS* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1753 393 MobiDBLite consensus disorder prediction 117 135 - -
Lja5g1753 393 CDD Mrs2_Mfm1p-like 28 390 IPR039204 -
Lja5g1753 393 Gene3D - 13 99 - -
Lja5g1753 393 PANTHER MAGNESIUM TRANSPORTER MRS2-I 1 393 - -
Lja5g1753 393 Gene3D Magnesium transport protein CorA, transmembrane region 106 323 - -
Lja5g1753 393 Pfam CorA-like Mg2+ transporter protein 269 381 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lja5g1753 393 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 393 IPR039204 -
Lja5g1753 393 Coils Coil 194 221 - -
Lja5g1753 393 MobiDBLite consensus disorder prediction 116 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1753 Lja-Chr5 19837656 19845295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1753 1 366 MRS2 Gene Family AT5G64560 80.978 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1753 K16075 - gmx:100810239 665.996