Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1746 ATGGAACCACCAATGCGACAACCACCTCCGCCGCGTTCCTCCGCCGCTACGACCATCCTCGGCAAATACCAGGTCATCCGCCTCCTCGGCCGCGGAAGCTTCGCGAAGGTCTACCAAGCCCGCTCCCTCATCGACGGCACCATCGTCGCCGTCAAAATCATCGACAAATCGAAGACCGTTGACGCCGCCATGGAACCTCGTATAGTCCGTGAGATCGACGCCATGCGCCGCCTCCACCACCACCCCAACATCCTCCGCATCCACGAGGTCATGGCGACGAAAACCAAGATCCACCTCGTCGTTGAGTTCGCCGCTGGCGGCGAACTCTTCTCCGCCATCTCCCGCCGTGGGAAGCTCCCGGAGAATACAGCTCGCCGCTACTTCCAGCAGCTGGTCTCCGCTCTCCGATTCTGCCACCGTAACGGCGTCGCCCACCGCGACCTCAAGCCGCAGAATCTCCTCCTCGACGCCGCTGGTAACCTCAAGGTCTCCGACTTCGGACTCTCCGCCTTGCCGGAGCATCTCCAGAACGGGCTCCTACACACCGCTTGCGGTACTCCGGCGTATACCGCGCCGGAGATTCTCCGTCTCAGCGGCGGATACGATGGCTCCAAGGCCGATGCATGGTCCTGCGGCCTCGTCCTCTTCGTCCTCCTCGCCGGGTACCTTCCCTTCGACGATTCCAACATCGCGGCGATGTACAGGAAGATTTCCCGGCGAGACTACCAGTTCCCGGAGTGGATCACGAAGCCGGCCCGGTTCGTGATCCGCCGGTTGCTCGACCCGAACCCGGAGACCCGTATGAGCGTGGAGGATCTGTATGGGAACTCATGGTTCAAGAAATCGCTGAAGGTGGAAGCTGAATCAGAGACAGAGAGTAGCACCCTCAATTTGGATTCTGGGTATGGAAATAGAGTGAGAGGTTTGGGGGTGAACGCGTTTGATTTGATATCAATGTCTTCAGGGTTGGATTTGAGTGGGTTGTTTCAGGATGAGGGAAAGAGGAAGGAGAAGAGGTTCACTTCTGGTGCAAAGTTGGAGGTGGTGGAGGAGAAGGTGAAGGAGATTGGAGGGGTTTTGGGGTTTAAGGTTGAGGTTGGGAAGGATAGTACTGCAATTGGGTTGGTGAAAGGGAAGGTGGCTTTGGTAGTTCAGGTGTTTGAGATTTTGCCTGATGAGCTTCTTCTGGTGGCTGTTAAGGTGGTGGAAGGTGGGTTGGAGTTTGAGGAGAATCATTGGGGTGATTGGAAATTGGGGTTGCAAGATCTTGTGCTCTCTTGGTATAATGAATGA 1293 0.5677 MEPPMRQPPPPRSSAATTILGKYQVIRLLGRGSFAKVYQARSLIDGTIVAVKIIDKSKTVDAAMEPRIVREIDAMRRLHHHPNILRIHEVMATKTKIHLVVEFAAGGELFSAISRRGKLPENTARRYFQQLVSALRFCHRNGVAHRDLKPQNLLLDAAGNLKVSDFGLSALPEHLQNGLLHTACGTPAYTAPEILRLSGGYDGSKADAWSCGLVLFVLLAGYLPFDDSNIAAMYRKISRRDYQFPEWITKPARFVIRRLLDPNPETRMSVEDLYGNSWFKKSLKVEAESETESSTLNLDSGYGNRVRGLGVNAFDLISMSSGLDLSGLFQDEGKRKEKRFTSGAKLEVVEEKVKEIGGVLGFKVEVGKDSTAIGLVKGKVALVVQVFEILPDELLLVAVKVVEGGLEFEENHWGDWKLGLQDLVLSWYNE* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1746 430 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Lja5g1746 430 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g1746 430 PANTHER SERINE/THREONINE KINASE 15 429 - -
Lja5g1746 430 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g1746 430 Gene3D Kinase associated domain 1, KA1 313 425 - -
Lja5g1746 430 Gene3D Transferase(Phosphotransferase) domain 1 13 312 - -
Lja5g1746 430 Pfam NAF domain 311 365 IPR004041 GO:0007165
Lja5g1746 430 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 15 429 - -
Lja5g1746 430 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g1746 430 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Lja5g1746 430 CDD CIPK_C 312 421 - -
Lja5g1746 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Lja5g1746 430 SUPERFAMILY Protein kinase-like (PK-like) 19 291 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1746 Lja-Chr5 19657082 19659281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1746 1 429 CBL-interacting serine-threonine protein kinases AT4G14580 59.815 1.09e-176 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lja5g1746 Pkinase 1.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1746 K12761 - gmx:100784173 647.891