Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1710 ATGGTGTATAAATCGTCTATGAAGAAGGTCATGGCTAGTTTGCTGACCGTGTTTTTGCTAATCGAGGTGATTTCTTGCGGATTTGGATTCGGAGGAAATAATGGCTTAAACATGAACTACTACTTGATGAGGTGCCCTTTTGCTGAGTCTGTTGTTAAGAACATTGTCAACAGAGCTTTGCAGAATGATCCCACCCTCGCAGCTGGTCTTATTAGAATGCACTTCCATGACTGCTTCGTAGAGGGATGTGATGGGTCAATTCTGATAGACTCCACTAAGGATAATACAGCAGAAAAGGACTCCCCTGCTAATTTGAGCCTGAAAGGCTACGAAATCATAGATGAAATCAAAGAAGAGCTTGAAAGACAATGCCCAGGGGTGGTTTCATGCGCTGATGTTCTTGCTATGGCTGCAAGAGATGCAGTTTTCTTTGCTGGAGGCCCAGTGTATGACATACCAAATGGAAGAAAGGATGGAAGAAGGTCCAAAATTCAGGATACTATCAACTTGCCATCCCCTACCTTCAATGCTTCTGAGCTAATTAGACAGTTTGGGAAACGTGGCTTTTCTGCACAAGAGATGGTGGCTCTTTCCGGGGCTCATACACTAGGAGTGGCAAGGTGTGCTTCTTTCAAGGACCGATTGAGCCAAGTGGATCCAACTCTGGATACAGGTTTTGCCAAGACACTGTCAAAAACTTGCAGCTCCGGCGACAACGCGCAGCAGCCGTTCGACGCCACGAGCAACGACTTTGACAACGTTTACTTCAACGCTTTACAGAGGAAGAATGGGGTGCTTACATCAGACCAAACACTGTTCGCTAGCCCCCAAACTAGGAACTTTGTGAATGGTTATGCATTCAACCAAGCCATGTTCTTCTTTGATTTCCAACGAGCAATGGTGAAGATGGGCCAGCTTGATGTCAAACTTGATTCCAATGGTGAAGTGCGAGAAAATTGCCGCAAACTAAACTAA 975 0.4533 MVYKSSMKKVMASLLTVFLLIEVISCGFGFGGNNGLNMNYYLMRCPFAESVVKNIVNRALQNDPTLAAGLIRMHFHDCFVEGCDGSILIDSTKDNTAEKDSPANLSLKGYEIIDEIKEELERQCPGVVSCADVLAMAARDAVFFAGGPVYDIPNGRKDGRRSKIQDTINLPSPTFNASELIRQFGKRGFSAQEMVALSGAHTLGVARCASFKDRLSQVDPTLDTGFAKTLSKTCSSGDNAQQPFDATSNDFDNVYFNALQRKNGVLTSDQTLFASPQTRNFVNGYAFNQAMFFFDFQRAMVKMGQLDVKLDSNGEVRENCRKLN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1710 324 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Lja5g1710 324 Gene3D Peroxidase, domain 2 171 303 - -
Lja5g1710 324 PANTHER PEROXIDASE 25-RELATED 29 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 Gene3D - 39 324 - -
Lja5g1710 324 Pfam Peroxidase 52 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 SUPERFAMILY Heme-dependent peroxidases 35 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 ProSiteProfiles Plant heme peroxidase family profile. 35 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 CDD secretory_peroxidase 36 322 IPR033905 GO:0004601|GO:0042744
Lja5g1710 324 PANTHER PEROXIDASE 47 29 322 - -
Lja5g1710 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Lja5g1710 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1710 324 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1710 Lja-Chr5 19052763 19056588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1710 4 324 Peroxidase AT4G33420 71.340 1.42e-170 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1710 K00430 - gmx:100776019 541.191