Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1679 ATGGCCAATGTTTTAAATCACAACTGGTTCTTCTCAGTATTTCTTTTGATTCTCTTGCTCCAAATCCAAACCAAAGTGCTCTGTTTCCAGTACAAAGTTGGAGATCTAGCTTGTTGGGGACTACCCACCTCAGCAAATTCACAACTCTATGGAAAATGGTCCAAATATCACAATCTCACACTTGGAGACTCTCTTTTGTTTCTATACCCACCAAGCCAAGATTCAGTGATTCAAGTAACAGAGGAATCCTTCAAGAACTGCAACATTAAAAACCCAATTTTGTTTATGAGCAATGGGAACTCTTTGTTTAACATTACAACATCAAAAGGAGATTTCTACTTCACAAGTGGAGTTGCTGGCCATTGCCAGAAAAATCAGAAGCTTCATGTATCAGTTGGCGGTGGTGGCGGTGGAGGAGGAGTGGATGCAGCAGCTGGTCCAAGTTCATTGAATGCATTTGCACCTTCTTATCAGACAGCGTTTGGCAACATTCCAGTGGCTCCTTCCACTTCCTCTGCCTCATGTCATCTAACTTCAACTTTTCAAGTTCTCATCATTGGATCCGTGATAGGTGCATTGTTCTCTGCCTTTATGTAA 597 0.4171 MANVLNHNWFFSVFLLILLLQIQTKVLCFQYKVGDLACWGLPTSANSQLYGKWSKYHNLTLGDSLLFLYPPSQDSVIQVTEESFKNCNIKNPILFMSNGNSLFNITTSKGDFYFTSGVAGHCQKNQKLHVSVGGGGGGGGVDAAAGPSSLNAFAPSYQTAFGNIPVAPSTSSASCHLTSTFQVLIIGSVIGALFSAFM* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1679 198 Gene3D - 29 139 IPR008972 -
Lja5g1679 198 ProSiteProfiles Phytocyanin domain profile. 29 134 IPR003245 GO:0009055
Lja5g1679 198 PANTHER BLUE COPPER PROTEIN 9 190 IPR039391 GO:0009055
Lja5g1679 198 PANTHER MAVICYANIN 9 190 - -
Lja5g1679 198 Pfam Plastocyanin-like domain 48 125 IPR003245 GO:0009055
Lja5g1679 198 SUPERFAMILY Cupredoxins 28 132 IPR008972 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1679 15 166 Phytocyanin Superfamily AT1G64640 55.921 1.83e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1679 - - gmx:100527517 255.758