Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1678 ATGGGTTCAGGAACCAGAACCTACTCCCTGAACTCCGGCGACTACAATCTTCTAGAAGAAGTCGGTTACGGCGCAAGCGCGACGGTGTACCGCGCCGTCTTCCTCCCTCGGGATGAAGAAGTGGCGGTGAAGTGCGTCGATCTGGACCGCTGCAACGCCAATTTGGAGGATATACGGCGGGAGGCGCAGACGATGAGCTTGATTGACCACCGCAACGTGGTGCGAGCTCACTGCTCGTTTGTTGTTGACCGGAGGCTGTGGGTGGTGATGCCGTTCATGGCGCAGGGGTCGTGTTTGCATCTGATGAAGGTGGCGTATCCTGATGGATTTGAAGAGGAAGCTATTGGATCGATCTTGAAGGAGACGCTGAAGGCGTTGGAGTATCTTCACCGCCATGGCCACATTCATAGGGATGTTAAGGCTGGGAATATTCTTCTTGGGTCTGATGGGCAAGTCAAGCTTGCTGACTTTGGTGTTTCTGCTTCCATGTTTGATGCTGGTGAACGGCAGCGGAATAGGAACACTTTTGTTGGAACTCCTTGCTGGATGGCGCCGGAGGTACTGCAACCTGGAACGGGATATAATTTCAAGGCTGATGTTTGGTCTTTTGGAATTACGGCACTGGAGTTGGCTCATGGTCATGCACCTTTCTCAAAATATCCTCCCATGAAGGTTCTTCTCATGACTATCCAGAATGCCCCTCCAGGACTCGATTATGATCGTGATAGAAAATTCTCCAAGTCTTTTAAGGAGATGGTTGCTATGTGCCTGGTAAAAGATCAAACAAAGAGGCCATCCGTGGAGAAGTTACTCAAACACTCCTTCTTTAGACAAGTAAAGCCTCCAGAGCTTTCTGTGAAGAAATTATTTGCTGATTTACCACCTCTTTGGCATCGTGTAAAAGATCTCGAGCACAAAGATGCAGCCCAACTAGCACTAAAGAAAATGGCATCTGGAGATCAAGAAGCAATGTCTCAGAGTGAATATCATCGAGGAGTTAGTGCTTGGAACTTCGATGTTGATGATTTGAAAGCTCAAGCTTCATTGGTGCAGGACGACGATGATGTTGCAGAGATGAGGGAAGAAGATGAAAACAATTTCTTCAGCTACAAGGATACAACTGATTCCCAGTTTAGCGTGGGCGAAAAGAATTCAGTTAACTCGCAACAAGATGAGTTTACATTACAAGTAGGTGGTAATGACATAACTCAGAGTGATAAGAGAAATGAGTCAATTGTTGAAGCAACATCAACTACTTTAGAGAAGGACATGGAAACAAGCAAGGTTAAAACTCCAGTGAAAATTGTTAAAACCCAAAGTGGGCCGCTGGTGCCTGGCACAGTGCTTAGTCATTCTTTTTCAGAAAGAGGGCGAGCATTTGAAAGGTTTGAGAATGAAAATCAGTTACCTGGTGAGAAAAGTAATCGTGATATACGTCGAGCCCCTAGCTTTAGTGGTCCATTGATGCTTCCAAACCGAGCTTCAGCAAATAGTTTATCAGCTCCAATAAAATCTTCTGGAGGATTCAGAGATTCCTCAGACGACAAGTCTAAGGCTAATCTAGTACAAATTAGAGGACGGTTCTCAGTGACATCAGAAAATTTAGATTTGGTGAAGGATATTCCTGTAAGTTCAATTTCACGCCGATCTTCACAGGAATCACCACTGAAGAAATCAGCCAGTGTTGGTGATTGGAAGTTGGATTCCAAACAAATGCCAATTGGACAGACCTCCATTGATTCTGCCAATGTCAATGTTCCTGGATCACTTGTGCCTCACCTTCATAATCTTTTGCAGCAGACATCTATTCAACAAGATCTTATAATTAATCTGTTGAGTAGCTTGCAAAGTGCTGAGGCAATAGATGCTTCTCAGAATGGAAAGCTGCCACCTTTACCTCGCAGTCCTGAGAACAATGGAAGTGTTGATACAGCAGCAGCTTCTGAGAGGGAAACTCTTCTGCTCGTCAAAATTTCAGAACTTCAGTCTCGGATGATCAATTTGACGGAGGAATTGACTTCTGAGAAGGTAAAACACAAGCAGTTGCAACAACAACTAGCTGCAATCTACAGCCAGGAACAAAATGGGACAAGAGAGGAAGTTGCATGA 2109 0.4514 MGSGTRTYSLNSGDYNLLEEVGYGASATVYRAVFLPRDEEVAVKCVDLDRCNANLEDIRREAQTMSLIDHRNVVRAHCSFVVDRRLWVVMPFMAQGSCLHLMKVAYPDGFEEEAIGSILKETLKALEYLHRHGHIHRDVKAGNILLGSDGQVKLADFGVSASMFDAGERQRNRNTFVGTPCWMAPEVLQPGTGYNFKADVWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPSVEKLLKHSFFRQVKPPELSVKKLFADLPPLWHRVKDLEHKDAAQLALKKMASGDQEAMSQSEYHRGVSAWNFDVDDLKAQASLVQDDDDVAEMREEDENNFFSYKDTTDSQFSVGEKNSVNSQQDEFTLQVGGNDITQSDKRNESIVEATSTTLEKDMETSKVKTPVKIVKTQSGPLVPGTVLSHSFSERGRAFERFENENQLPGEKSNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSSDDKSKANLVQIRGRFSVTSENLDLVKDIPVSSISRRSSQESPLKKSASVGDWKLDSKQMPIGQTSIDSANVNVPGSLVPHLHNLLQQTSIQQDLIINLLSSLQSAEAIDASQNGKLPPLPRSPENNGSVDTAAASERETLLLVKISELQSRMINLTEELTSEKVKHKQLQQQLAAIYSQEQNGTREEVA* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1678 702 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g1678 702 MobiDBLite consensus disorder prediction 625 644 - -
Lja5g1678 702 CDD STKc_OSR1_SPAK 14 276 - -
Lja5g1678 702 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lja5g1678 702 MobiDBLite consensus disorder prediction 490 507 - -
Lja5g1678 702 SUPERFAMILY Protein kinase-like (PK-like) 13 329 IPR011009 -
Lja5g1678 702 MobiDBLite consensus disorder prediction 486 516 - -
Lja5g1678 702 Gene3D Transferase(Phosphotransferase) domain 1 96 329 - -
Lja5g1678 702 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Lja5g1678 702 Pfam Protein kinase domain 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g1678 702 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 695 - -
Lja5g1678 702 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 695 - -
Lja5g1678 702 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g1678 702 Coils Coil 658 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1678 Lja-Chr5 18519491 18527302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1678 8 694 MAP Kinase Kinase Kinase Kinase AT4G10730 64.173 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lja5g1678 Pkinase 2.2e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1678 - - gmx:100783699 1162.52