Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1672 ATGAAGGGGCGATCGCACCGCCCTCAGAGTTCCGACCCGCCGGACGATTGGGTCGACGGTTCATGGACCGTGGACTGCGTCTGCGGCGTCACCTTCGACGACGGCGAAGAGATGGTCAAGTGCGACGAGTGCGGCGTCTGGGTCCACACGCGCTGCTCCCGCTACGTCAAGGGCGACGACACGTTCTCCTGCGACAAGTGCAAGAGCAAGAGCAAGAGTAAAACCACCACCAGCAACAACAACAGCAACAACAATCGGGTTGACCGCATCACCGAGGAAACCGAGGTTGCTCAATTGCTGATTGAGCTTCCAACCAAGACTATGTCTATGGAGAAGAATCACCATAACCTCCACCACAACAGCAACAACAGTTCGTTCTCCGCGTCGAAAGTCGTCGCGTCTCGATCTCGCCGCCCTTTCAAGCTATGGGCAGAGAAGCCCATGGAGGAGAAGGTTCATGTTCAGGGCATCCCTGGTGGTGACCCTTCTCTGTTTGCAGGTAAGGCTGTGCCGTCGATTTTCGGTCCCCAGTTGTGGAAGTGCACCGGTTATGTTCCGAAGAAGTTTAATTTTCAGTATAGGGAGTTCCCCTATTGGGATGATGAGAAGAAGAATGAGGGTACGCAGGAGAATGATAATGGGGCTGGGGTTCTGTTCTCTTTTTCGAAAGAAACTAGTGCTATCATGAATTCCCCTGTTGCTGCTTTGGTTGATATGAGATCCAGCCACGGGAAAGCGGGCTCGTTCAAGGATATGGGAATGGGGAAATTTGGCCGCGGGGAGGACGCTCCGCGTGTCCAGAGTACGATGAAGAAGGAGAGCGGCTGGCTGAGGCCTCTTGTTGTTCATAGCAGTAAGAAAAGGAAAGAGGACTTTGCGAATTCTAATTCCAAAGACAAAAGTGGGAAGAAGCGGGTTAGGACTTCTGACAAAGATTTTGATCCTAGGAGGAGGAGTTCACATTCTTCTAAACCAGCATTTCCACCCACCAGAGATGCAAAACAAATGGAATTTTATGAGGACAGGGGTCCGAAGATTTTAAAGGCCGATACCCGGAGCTTAAAGAATAAGAACTTGAAAGACAAAGTGGTTCAAGAACATATTTCTAATGATTTTACTGTGGATACCATTGTGGAAGAGCCAAGCAACAACTTGACTGCTACTGAGGAGTCTTCAGAAGCTTTATATCCTAAAATGGCAAGACGTAGTCTTTCTGATGGAGATGCATTAGCAGAAGAGAAGACCGGCCGTAAATCTGTTGAGATGTCTTCTAAGACTGATGATGCTGTTACGTCAGCTCTAAATCATAATTGTGTTGAAATTGCGTCAGTTAAAGAGAAGGATGGAGATTGCTTGGCAGCTGAAAATATGGATGATACTTTAGTAGGAAGAAGCACTGAGAGTCCTCACAGAGAAGGTCGTTGTGGTTCTGCTTCCAAACTTATGGATAACCAAGTTTCTCAAGATCTTGCCTGTAATCTGCGTCCTTGCTCTGCAAAACGCAAAGTTAGGGTGAAGAGAGAAGATGACGGTGATAATTTTAAGCTCTCCAATTTTCATTCTTCTCCTATTAGTGATCTTAAAATCAATGAAAAGCCAGCTGATCACTCATCTGATATTGTTAAAGTGAATGAGGCTGTGGTTCCCAGTTTATCGTCGTGTAAAAATAAGGTGGGTGATGTTGACATATCATCAGAAGTAGCCCCTGATGATCATAGCAATAAACCCAAGGAGTTACCTGGTAATTTTTGTCATGGAAAACAAGAAGTGGAGGGGTCTAAAGGTTCCTTTGAAACACTCAAGGAATTTTCAGAAACAAAAGATAGTCCAGATTCTGCTAAGGATCCATCGAAATCTGAAGCACTTGGATGTCTGCAAAAAATGCCAACATGTGTTGGAAAGTCATCTCCAGCTTCATCAACCATGAACTCCAAATCTTTGAGTCAAAACTTCAACTCTGAAGATGCTGAAATCCAAAATTCTTTTACTAAGCAACGTGTGATGGTTGATTGTAACATTCCTGTAAAGAATGAAAGTAGTCCACATGATGCTGCAAAGGATGAAAATCCCAAGAAGTTTGTAAGAGAGAGATCAAAATCTTCTTTGCATTCCAATTCAAAAGGATTACATTCAAGCAGGAGTTTGCAAAATTCTGTTTCAAAGCAAGCAATTTCAGAGGCTAGGGATTCTGTTTCAAAGCAAGCAAGTTCAGAGGCTAGAGATTCTGTTCATTGTTCGTCATCTAAAGCATCATCGGGACATCAAACTTCAACTAATTTAGGTTCTAGTGAAACTAATGCATCATTGCACCAGCAAAAGGCTTTACAAGTGCAGAATAAGATTTCTTCAGTGCCCCCGAAAGTTGAAAAGGCTAACCAAACAAATATACATTCTTCCTCTAAGTCTAATCAGAACCATGTGCCAACAGTGAATCCTTCTCCAACATCAAATTCTTCAATGCTGAGTGATGAAGAGCTTGCTTTGCTATTGCATCAAGAACTAAATAGTTCACCTCGGGTACCTAGGGTGCCCCGTGCACGCAATACGGGTAGCTTGCCACAATTGAATTCTACTAGTGCTACAAGCATGCTAATGAAGCGAACAACATCGGCTGGAGGAAAGGATCACTATTTGGTATCTAGAAGAAAATACAAGGATGCATCTAGAGATGGGTTTTGCAGTTCCCGTGAGCCTGAGGATGAAGCTAAAATAGAAAAGGAGAAGGGTCCATCCTCATCTGATCAGAGAAAACAAAATATGGAATGTGTAGAAGATACTTCTGTAAAGGAAGGAGGCCATGCATCAGTGATAGCTTCAAACACTATCACAAACAACGTTGTTTCTGCCACCTCTGCCATTGCAAATAGCAGTCCACACTCCCCTTCAGAGGAGCAGAGTTTTTCATTGATACGGAACTCCCCCAGGAATATATCTGATGATGACACCGCAACTGCTGGAAGGCCAGTTCATCACACCTTACCTGGTTTAATCAATGATATTATGAGCTCCGGCAAGCGTATGACATATGAAGAACTCTGCAATGCTGTGCTTCCCCACTGGCACAACTTGAGGAAGCATAATGGAGAGCGCTATGCATACTCAAGTCATTCTCAGGCTGTTCTTGACTGTTTGAGGAACCGGCATGAATGGGCAAGGTTGGTTGATCGTGGTCCAAAGACAAATACAAATCGGAAAAGGCGTAAACTGGATGCTGAAGAATCTGATGACAGTGGATATGGCAAAGGAAGAACTGCAAAAGAGGTGGAAGGGAAGAACTTTGAGTTGCAAAAAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCAAGAAAGCGCAGGCGCCTAGCTCTTCATGGACGAGCAGTAAACGACGTGAGGAGGAGACAAAAAGCTGACTCGCAAACTGATGAGGATGTGGGCCCATTCTCCAATTCTAGTGAAGAGAGCATATTTAGTGAGGATGAAATTCAAAATGGCAGAACAGGCCCAGCAGGAAGTACATCAGATGAGGCAGGTAGTGCCTAA 3519 0.447 MKGRSHRPQSSDPPDDWVDGSWTVDCVCGVTFDDGEEMVKCDECGVWVHTRCSRYVKGDDTFSCDKCKSKSKSKTTTSNNNSNNNRVDRITEETEVAQLLIELPTKTMSMEKNHHNLHHNSNNSSFSASKVVASRSRRPFKLWAEKPMEEKVHVQGIPGGDPSLFAGKAVPSIFGPQLWKCTGYVPKKFNFQYREFPYWDDEKKNEGTQENDNGAGVLFSFSKETSAIMNSPVAALVDMRSSHGKAGSFKDMGMGKFGRGEDAPRVQSTMKKESGWLRPLVVHSSKKRKEDFANSNSKDKSGKKRVRTSDKDFDPRRRSSHSSKPAFPPTRDAKQMEFYEDRGPKILKADTRSLKNKNLKDKVVQEHISNDFTVDTIVEEPSNNLTATEESSEALYPKMARRSLSDGDALAEEKTGRKSVEMSSKTDDAVTSALNHNCVEIASVKEKDGDCLAAENMDDTLVGRSTESPHREGRCGSASKLMDNQVSQDLACNLRPCSAKRKVRVKREDDGDNFKLSNFHSSPISDLKINEKPADHSSDIVKVNEAVVPSLSSCKNKVGDVDISSEVAPDDHSNKPKELPGNFCHGKQEVEGSKGSFETLKEFSETKDSPDSAKDPSKSEALGCLQKMPTCVGKSSPASSTMNSKSLSQNFNSEDAEIQNSFTKQRVMVDCNIPVKNESSPHDAAKDENPKKFVRERSKSSLHSNSKGLHSSRSLQNSVSKQAISEARDSVSKQASSEARDSVHCSSSKASSGHQTSTNLGSSETNASLHQQKALQVQNKISSVPPKVEKANQTNIHSSSKSNQNHVPTVNPSPTSNSSMLSDEELALLLHQELNSSPRVPRVPRARNTGSLPQLNSTSATSMLMKRTTSAGGKDHYLVSRRKYKDASRDGFCSSREPEDEAKIEKEKGPSSSDQRKQNMECVEDTSVKEGGHASVIASNTITNNVVSATSAIANSSPHSPSEEQSFSLIRNSPRNISDDDTATAGRPVHHTLPGLINDIMSSGKRMTYEELCNAVLPHWHNLRKHNGERYAYSSHSQAVLDCLRNRHEWARLVDRGPKTNTNRKRRKLDAEESDDSGYGKGRTAKEVEGKNFELQKEEFPKGKRKARKRRRLALHGRAVNDVRRRQKADSQTDEDVGPFSNSSEESIFSEDEIQNGRTGPAGSTSDEAGSA* 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1672 1172 MobiDBLite consensus disorder prediction 64 85 - -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 704 819 - -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 1134 1172 - -
Lja5g1672 1172 ProSitePatterns Zinc finger PHD-type signature. 26 67 IPR019786 -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 1116 1133 - -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 882 929 - -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 1055 1102 - -
Lja5g1672 1172 SUPERFAMILY FYVE/PHD zinc finger 14 73 IPR011011 -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 564 819 - -
Lja5g1672 1172 PANTHER UNCHARACTERIZED 1 1168 - -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 250 335 - -
Lja5g1672 1172 SMART PHD_3 25 68 IPR001965 -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 283 321 - -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 1055 1172 - -
Lja5g1672 1172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 76 IPR013083 -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 405 424 - -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 680 703 - -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 632 667 - -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 564 584 - -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 835 862 - -
Lja5g1672 1172 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 1 1168 - -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 591 615 - -
Lja5g1672 1172 MobiDBLite consensus disorder prediction 882 928 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1672 24 67 PHD Transcription Factor Family AT5G22260 44.681 4.50e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1672 - - gmx:100810855 1469.91