Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1665 ATGGAAAACAATAAGAACTACATCTTAATATCAGATTCTGAGGATGAAGGAGAAATAAGAGATTTTGATTTAAATGAAGAGCCTCCTTCTCCAATCATTGATTTAAATGAAGTGCCTCCTTCTTCTCCCATTGATTTAATTGGAGTTCCTTTTAATTCTCAGGTCTATGCTATTGATTGCAACATGCCAATGGATGACGACCTAGCTCAAACATCATTGACTCCTCCTAAAGTACATGTTACAACAGATAGTCATGAACAACACAATAATGGGAAGCGGGTTAACTTGGAAATTCATGATACTAATAAAGGTAAAATGTCAATGTATTGTTTGGAGGAAGCAAGTGCTAAATTTGGTGAAGGCTGGTCAGTAACTAAAGATTTCCAATTAGGAGGAAAAAGCAACAAAAATGAAGCCACTCAACGAAGCATCTTACCTCCTGAAAAGGTTGTTGTTGCTGCTTCTGCTGCTCTGGAATCTGGATCAAAAAGGAGCTACTTCAGTTGCATAACTGCTGGATGTCCTGTTAGGAAGCAAGTTGAGAGAGCTCCGCAAAATTTGAAATATGTGGTTGTTACTTACGAGGGCACACATAATCACAAGGTTACCATGGAAAAACATATAGATCCCTCACTTGATGCTGATAAATTTCTCAAAGTCGCTGCTTCGCTATCGACTGTTGCAATACCTGGGAATGTTAATATTCCAAAGCATGGAGCCAATCGTGAAGATGACAATGATTTTGCGAGGCTCCCTTCGGGGCAAAATTTCTGCAATGACCATGGGAATGTTGAATCTTCCTCCACAAACCAAATTCAGTTTATCAACTTGAAGAACGATGACAATGATATATGA 855 0.386 MENNKNYILISDSEDEGEIRDFDLNEEPPSPIIDLNEVPPSSPIDLIGVPFNSQVYAIDCNMPMDDDLAQTSLTPPKVHVTTDSHEQHNNGKRVNLEIHDTNKGKMSMYCLEEASAKFGEGWSVTKDFQLGGKSNKNEATQRSILPPEKVVVAASAALESGSKRSYFSCITAGCPVRKQVERAPQNLKYVVVTYEGTHNHKVTMEKHIDPSLDADKFLKVAASLSTVAIPGNVNIPKHGANREDDNDFARLPSGQNFCNDHGNVESSSTNQIQFINLKNDDNDI* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1665 284 SMART WRKY_cls 156 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja5g1665 284 SUPERFAMILY WRKY DNA-binding domain 159 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja5g1665 284 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 164 266 IPR044810 GO:0003700
Lja5g1665 284 Pfam WRKY DNA -binding domain 160 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja5g1665 284 Gene3D WRKY domain 131 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja5g1665 284 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 164 266 - -
Lja5g1665 284 ProSiteProfiles WRKY domain profile. 164 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1665 Lja-Chr5 18157562 18160828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1665 164 202 WRKY Transcription Factor Family AT2G38470 61.538 2.32e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lja5g1665 WRKY 6.7e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1665 - K13424 lja:Lj5g3v0550200.2 206.068