Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1661 ATGCATGCCACGGGTTCTATTCTCGGGAGTACCTGCATACAAAGACCAATATCTTCTCCGTTATTAGTCCTCAACCTTTCTCAACGGGAGGGTATTGATTCAAGCCAACAAAATGTAAGAAGTCAAGGAGGATTCTCCACAGACTGGCGTGAGCATCCTGAAATGTGTTACTGGCGCCACTACATTAGAAATATAATATATGAAATTTTACGCACCAGGGTTCATCATCAGCAAGCACAAGGGTCGTATCTTACTGCAGATATTCTAGAATTCGAGCTACTGAAGCATGCTGCTTCAGAGGAGGAGTATATAAACGAAGATACATTGTTACGGAGAGTGCAAACTCAACTCAATGATATGGGTAGGACAAAAGGCAGTCAACAAGTTGACAACTCTACCTCATATAAGACAGTGCCTTTACACTTTCCAGATACTGGTATGGATGAGCTTTCTCACATGATTTCTCTGGGTAGAAGAAATATGGCAGCTACAACCAATTCAAATGGTTTCAGTTTCCCTCAGAAACATGCAGATGAATTGGATATGGATCTTAACAATAATGGAAGCTGTTGGGGAAGTGTCCAGAAAAATGAACCTTGGGATTGTCACTCTGCTGCAATGGGGAAATCCCTCCGATCTGAATCTTCAAATTTGATGTTCCCTCAACATGTCTCAAGGGTAAATTCAGAAGTTTACAATCTTTTTCCTGGCTTGAACTCCAACTCAATCCTTGGAGATATTAGGCAATGTCAACCCCAGCCGATGCATTTACAACAAAGTTTTGAACAATTTATCCAGCCAAATGAGCTTTGTGGTAAATCTACTACTTTCCAGACTGGTTCATCCTTTCTAGATCGCGACGAAAATTGCGATCAAATGTCAGGGAAGAAAGCACTGAAGCGGCCCTGGCTAGATTCATGCTGTGACTCTAAAGGGATGCTGCGACCTGACAAAATACTAAAAATGATGTCTGATTTTGATGTCTCTTCCATTAATGATACAATCTCTGATCAATGTACTACCAAGACGTCTCAACCTTATTCTTCAGAAGAAGCACTTCCAGAATTGCAGCAACAGCGAGAAACTTCCATTTCTTCTATGTATTCTGATGTTGCAAATTGCCATGTGGAACGTTTTGCATATCCACGGCCTGATTCTATGAGCATATGTGGTCAAATACTAGAGGAGTCAGACCTCAGAAGCCATGATCCAAGAGATAGCAGCAACTTAATGGAAACTGACAATAGATTGAATTCTAGTATGCATACTCTCTGGTGTGATCCTATTGCTGCTGATATAGAGGACATACGTGGCAAAACTGGAGTTTCGGAGCAATCGGAAAATCCTATGCATGATTCAATGCCAATCAGTGAGACGGTGAACAATGTGATTGATGAAATGCTTCCGCAGACTTTTAAGAGTGATACAATTCATTATAAAGTCTTAGAAGCTGGTCATATGTCGGAGGAGCCAGAGCCCACAATTGATTCTATGGGCATTGACGATACGTTTGGGAAGGCTTTCAAGAGTGGAACGGTTCACCCTAAAGGCTTAGAAGATTGTCATATATCAGAGGACTCAGACCACGAAAACCATGTTCCCACCAACAGCAATAACTCGAAGGATACTAAAGTTAGTTTGAGTTCCAGTATGCGTTCCCTCAGCCATGTTCACATTGCTGCAGATGTAGAGGACTCAGACCCCGAAAACCATGTTCCCGCAAACGGCAATAACTCGAAGGATACTGAAATTAATTTGAGTCCCGGTATGTGTTCCCTCAGCGATGTTCATATTGCTGCAGCTGTAGAGGACATAAGTGGAAGAATTGGATTCAACCTGGCTCGGATAAATGCTGAAAATAAAGTCAGTGAGGAAAAAGTTGATGAAAAGAAGGAAACCAAGTTCTCAAAAATGACAGCTAATATTGTTTCCTTAACTGATTTTTTCACAAGTAATCAAATCAGAGAACACATTAGAAGTCTGAGAAAGCAGCCTGTCCAGAGTATGCCTGGGGAAGAAGCGGGAATTGTTGTTAGTACATGCCAATTATGTGCAATGCAAAAGCTCTATTATGCACCAGTGCCAATTTATTGCTCATGTTGCAATAAGCCGATTAAGCTAAACACAGACTACTACCATAAAAAAGCAGAAGAATCTGATTCACAAAATTTCTTTTGCACTGTGTGTTATAAGAAGTCTCGAGGTGAGCACATCACATTCAACGCAATATCTGTTCAGAAGGAACTTCTTGATAGAAAGACTAATGATGAAGTATTTGAAGAAGGGTGGGTTGAATGTAAAAAATGCGAAAGATGGCAACATCAAATATGCGCACTCTTTAACGGAAAGAGAGATCTGGTCATCTGTGCTGACTATATATGTCTTATATGCCGCTTGAAGGAAATTGAAGAAGGAATTCATATATCCTTACCAAAGACAGCTATTTTCGGTGCCAAGGACTTGCCAAGAACCATGCTTGGTGACCACATAGAGAAAAGACTTTTTAAGTGTCTCATGCAAGAGAGAGTAGACAGGGCAAAAGTCGAAGGGAATAAGAATCTTGATGAGGTTTTACCAGCAGACAGTCTTTCTGTTAAAGTAGTGTTATCTGCTGACAAACAATTGGAAGTGAAGAAGCAGTTTCTAAACATCTTTCCGGAGAAAAATTACCCTGCTGAGTTCCCTTATACATCAAAAGTTATTCTTCTGTTTCAGCAGATTGACGGAGCAGATGTTTGCCTTTTTGCAATGTATGTCCAGGAGTTTGGCTCAGAATGTGGCAATCCCAATAAGCGTTGTGTATATATTTCATATCTTGATTCTGTCAAGTATTTTAGGCCTGAAAGAGAGACTATAAGGGGAGAAGCTCTTCGCACCCTCGTTTACCATGAGATATTGATTGGATACCTTGATTTTTGCAAGAAGCGAGGTTTCACAACATGCTATATATGGGCCTGTCCTCCTACAAAGGGGGAAGATTACATACTGTATTGCCATCCTGACACTCAGAAGACCCCGAAGAATGATAAACTACGGCACTGGTATCTTTCAATGCTAAGGAAGGCTGCTGAAGAAAATATTGTTCTTGGTTTAAGTAACATATATGATCATTTCTTTGTTCCTACTGGGAAATGGGACTCCAAGGTGACAGCTTCCCGTTTGCCATACTTTGATGGAGACTACTGGTCTAGTCGTGCTATGGGTCTAGCCGGCGACATTGATAAAGACAGTGGGTATGAAAAGACATTGAAGAAACTTGTGAAAAACAAAAGAGCTTTAAAGGCCTTGGGGCATGTTAACCCTTCAATAGACACTGCCAAAGACATTCTAGTGATGCAGAGGCTGGGCAAAGAAATTCTGCCATACAAGGAAGACTTCATCATAGTTCACCTTCAGCATACATGCGTGCACTGCCAGGAAGTGATAGTTTCTGGGAAGCGGTGGTTTTGCACTGAATGCAAGAAATTTCAAGAGTGTGAAAGATGCCATACTGCTGACTCACACACTTCAACTAGTGGCGAGAAACATACACTCTGTCAGGTCCTCGTGGAAGATGTCCCTTTAGATACTAAAGAGAATGATATCATTCTTGACAATCAATTATTTGAGAATAGGCATAACTTCCTGAGCTTCTGCCAGAAGAATCTGCTACAGTTTGACACGCTCCGCCGCGCGAAGCACTCTACAATGATGATCCTCTATCACCTAAAGTATTCCTCAATATGTAGTATTTGCGGCTGTGAACGCAACGAATTTCAACATAGCTGTAGATGTGAGTGTTGTCCTGATATCTCTGCATGCAAGGAGAGAGGTGCTGAATGCCATGCACATGAGTTGAGTCAAACTCATTCAACATCACTATCTACCTCAGGGAATGAAGAGTCAAAGCTGAAATCAACATGCCATGAACAGAAGTTGAGTCAAACTCATTCAAAATCACTATCTGTGAAGAAACTGCTAGAAGTTCTGCAGCATGCATCTCAATGCAATAACTCAAACGAAACACAGCCATGCCCTTATACATACTGTCTGAAAATGAAAATGCTGTTATCTCATGCCAGAGAGTGCATTACTCGTGCTTCGGGGCGCTGTCGACCTTGTTACAAGGCATTGATGTTACTAGATGCTCACTCGAAGACATGTGAAGTCTCAGAATGTCCCATCCCATGTTGCATGAATCTGAAGAAGCGTCGAGAATCTCGAGATAGAGCTGCTGTTGTGAAAAGCAAACAGAGAACTTTCTGA 4245 0.4139 MHATGSILGSTCIQRPISSPLLVLNLSQREGIDSSQQNVRSQGGFSTDWREHPEMCYWRHYIRNIIYEILRTRVHHQQAQGSYLTADILEFELLKHAASEEEYINEDTLLRRVQTQLNDMGRTKGSQQVDNSTSYKTVPLHFPDTGMDELSHMISLGRRNMAATTNSNGFSFPQKHADELDMDLNNNGSCWGSVQKNEPWDCHSAAMGKSLRSESSNLMFPQHVSRVNSEVYNLFPGLNSNSILGDIRQCQPQPMHLQQSFEQFIQPNELCGKSTTFQTGSSFLDRDENCDQMSGKKALKRPWLDSCCDSKGMLRPDKILKMMSDFDVSSINDTISDQCTTKTSQPYSSEEALPELQQQRETSISSMYSDVANCHVERFAYPRPDSMSICGQILEESDLRSHDPRDSSNLMETDNRLNSSMHTLWCDPIAADIEDIRGKTGVSEQSENPMHDSMPISETVNNVIDEMLPQTFKSDTIHYKVLEAGHMSEEPEPTIDSMGIDDTFGKAFKSGTVHPKGLEDCHISEDSDHENHVPTNSNNSKDTKVSLSSSMRSLSHVHIAADVEDSDPENHVPANGNNSKDTEINLSPGMCSLSDVHIAAAVEDISGRIGFNLARINAENKVSEEKVDEKKETKFSKMTANIVSLTDFFTSNQIREHIRSLRKQPVQSMPGEEAGIVVSTCQLCAMQKLYYAPVPIYCSCCNKPIKLNTDYYHKKAEESDSQNFFCTVCYKKSRGEHITFNAISVQKELLDRKTNDEVFEEGWVECKKCERWQHQICALFNGKRDLVICADYICLICRLKEIEEGIHISLPKTAIFGAKDLPRTMLGDHIEKRLFKCLMQERVDRAKVEGNKNLDEVLPADSLSVKVVLSADKQLEVKKQFLNIFPEKNYPAEFPYTSKVILLFQQIDGADVCLFAMYVQEFGSECGNPNKRCVYISYLDSVKYFRPERETIRGEALRTLVYHEILIGYLDFCKKRGFTTCYIWACPPTKGEDYILYCHPDTQKTPKNDKLRHWYLSMLRKAAEENIVLGLSNIYDHFFVPTGKWDSKVTASRLPYFDGDYWSSRAMGLAGDIDKDSGYEKTLKKLVKNKRALKALGHVNPSIDTAKDILVMQRLGKEILPYKEDFIIVHLQHTCVHCQEVIVSGKRWFCTECKKFQECERCHTADSHTSTSGEKHTLCQVLVEDVPLDTKENDIILDNQLFENRHNFLSFCQKNLLQFDTLRRAKHSTMMILYHLKYSSICSICGCERNEFQHSCRCECCPDISACKERGAECHAHELSQTHSTSLSTSGNEESKLKSTCHEQKLSQTHSKSLSVKKLLEVLQHASQCNNSNETQPCPYTYCLKMKMLLSHARECITRASGRCRPCYKALMLLDAHSKTCEVSECPIPCCMNLKKRRESRDRAAVVKSKQRTF* 1415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1661 1414 ProSiteProfiles Zinc finger ZZ-type profile. 1130 1186 IPR000433 GO:0008270
Lja5g1661 1414 Pfam Histone acetylation protein 852 1063 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lja5g1661 1414 SMART KAT11_2 850 1142 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lja5g1661 1414 PANTHER CBP/P300-RELATED 549 1396 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lja5g1661 1414 SUPERFAMILY FYVE/PHD zinc finger 760 800 IPR011011 -
Lja5g1661 1414 ProSiteProfiles Zinc finger TAZ-type profile. 1309 1394 IPR000197 -
Lja5g1661 1414 Coils Coil 613 633 - -
Lja5g1661 1414 SUPERFAMILY TAZ domain 1311 1396 IPR035898 -
Lja5g1661 1414 SMART TAZ_2 1310 1392 IPR000197 -
Lja5g1661 1414 MobiDBLite consensus disorder prediction 533 549 - -
Lja5g1661 1414 Gene3D TAZ domain 1304 1413 IPR035898 -
Lja5g1661 1414 SMART PHD_3 725 798 IPR001965 -
Lja5g1661 1414 Pfam TAZ zinc finger 1317 1390 IPR000197 -
Lja5g1661 1414 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 750 797 IPR013083 -
Lja5g1661 1414 PANTHER HISTONE ACETYLTRANSFERASE HAC2 549 1396 - -
Lja5g1661 1414 MobiDBLite consensus disorder prediction 561 582 - -
Lja5g1661 1414 Gene3D - 1129 1178 IPR043145 -
Lja5g1661 1414 SUPERFAMILY RING/U-box 1110 1172 - -
Lja5g1661 1414 ProSitePatterns Zinc finger PHD-type signature. 726 797 IPR019786 -
Lja5g1661 1414 MobiDBLite consensus disorder prediction 517 549 - -
Lja5g1661 1414 MobiDBLite consensus disorder prediction 517 532 - -
Lja5g1661 1414 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 815 1241 IPR031162 GO:0004402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1661 Lja-Chr5 18071429 18089599 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lja5g1661 HAT_KAT11 2.1e-29 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1661 K04498 - lja:Lj0g3v0312459.1 1334.7