Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1648 ATGTTCAAATTCCTGAAAGAAGTGGTCGGTGGATCTGGAACCGGCGTCAAGGATCTCCCTTACACCATTGGCGAACCTTACCCTTCTGCTTGGGGCTCTTGGCTTCATCACCGTGGCACCTCCAAGGATGATGGGTCACCGGTGTCGATTTTTTCTCTATCTGGGAGCAATGCTCAGGATGGGCATTTAGCTGCGGGTCGTAACGGTGTTAAGCGTCTGCGAACTGTTAGGCATCCGAATATTTTGTCATTTCTTCATAGTACCGAGATTGAGACTCACGATGGTGGTTCTTTGAAGGTCACGATTTATATTGTGACTGAGCCTGTGATGCCGCTGTCTGATAAGATTAAGGAGTTAGGTCTTGAAGGGACTCAAAGGGATGAATATTATGCTTGGGGACTGCATCAAATCGCGAAAGCTGTGAGCTTCTTAAACAATGATTGTAAACTTGTTCACGGTAATGTTTGCTTGGATAGTGTTGTCGTCACGCAAACTTTGGACTGGAAGCTCCATGCGTTTGATGTTCTGTCAGAGTTTGATGGGAGTAATGATGGTTCCGCTGGGCAGATGCTGCAATATGCATGGCTCATTGGATCACAGTACAAATCAATGGAGCTGGCAAAATCTGACTGGGCTGCAATTAAGAAGTCTCCTCCATGGTCCATTGATTCTTGGGGCATGGGTTGTCTAATCTATGAGCTATTCTCTGGCGTGAAGTTGAGCAAAACAGAGGAGTTACGCAACACTGGCTCCATTCCTAAGTCTCTGCTTCCAGATTACCAGCGGCTGCTGAGTTCCATGCCTTCTCGCCGATTAAATACATCAAAGCTTATAGAAAATAGTGAGTATTTTCAAAATAAGTTGGTAGACACAATACATTTCATGGAAATTCTCAGTTTGAAAGATAGTGTTGAGAAGGATACCTTCTTCCGCAAGCTTCCAAATTTAGCAGAGCAGCTTCCTCGTCCGATTGTGTTGAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCCCCGCTTTGACTGCATTGTTGAAAATGGGCTCCTGGCTTTCAGCTGACGAGTTTCGTGTCAAGGTGCTTCCAACAATTATTAAACTCTTTGCCTCCAATGACCGAGCTATTCGAGTTAGCCTTCTTCAACATATTGATCAATTTGGAGAGTCATTGTCTGTCCAAGTTGTTGACGAGCAGGTCTACCCTCATGTTGCTACTGGTTTCTCCGATACATCTGCTTTTCTGAGGGAACTTACTCTCAAGTCCATGTTAATTCTGGCTCCGAAGCTGTCTCAAAGGACCATTTCAGGATCATTACTAAAGCATCTGTCTAAGTTACAGGTTGATGAAGAAGCAGCAATAAGAACAAATACTACCATCTTATTAGGAAATATTGCAAGCCACTTAAATGAAGGGACAAGAAAGAGAGTATTGATTAATGCATTTACAGTCCGTGCTCTGCGTGATACTTTTCCACCTGCTAGAGGAGCAGGGATTATGGCTTTATGTGCCACCAGTTCTTACTATGACATCACTGAAATTGCTACACGAATTCTTCCTAATGTTGTTGTACTCACAATTGATCCTGACAGTGATGTTCGTTCTAAGGCATTTCAAGCTGTTGATCAGTTTCTGCAGATGGCGAAGCAATATTATGAAAAGACAAATACAGCTGAGGCAACTGGGGGGGCAGGCATGGGAATGTCATCAATTCCAGGAAATGCAAGTTTACTTGGATGGGCTATGAGCTCCTTGACCCTGAAGGGTAAACCTTCTGATCATGCTGCTCCTGTTGCTTCTATGAGTTCTTCTGCTCTTACTCCAACATCTTCGAATGCCAGCTCAGGTATTCTAGCTGTAGAAACTCCTTCAACAGCACCCGTCCGTGTAAGCTCCGCAACTGATTTCGCTGAGCAACCTGTCCCTACGTCTCCTACGTCAACAGATGGCTGGGGGGAACTAGAGAATGGACTCGATGGGCCTGAGAATGACAAGGATGGGTGGGATGATCTGGAACCACTTGAAGAAACAAAGCCAGCTCCAGCTCTTGCGAACATTCAAGCAGCTCAAAGGCGGCCTGTATCTCAACCTGTTTCGCAGTCAAAACAAGCCTCAAGTTTGAAATCCAAAAACACGCCAAGGTTGAGCAAGGATGAAGATGATGATTTGTGGGGTGCCATAGCAGCTCCTGCTCCAAAAACATCTTTAAATTTGAAATCAACTACGACTGAGGATGATGATCCCTGGGCTTCCATTGCTGCTCCTGCACCCACTACCAGGGCCAAACCCTTATCAGCTGGCAGAGGGAGGGGAGCCAAACCTGCTGCTCCGAAATTAGGTGCTCAGCGGATAAACCGGACGTCGTCATCCGGAATGTAA 2394 0.4553 MFKFLKEVVGGSGTGVKDLPYTIGEPYPSAWGSWLHHRGTSKDDGSPVSIFSLSGSNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEIETHDGGSLKVTIYIVTEPVMPLSDKIKELGLEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLDSVVVTQTLDWKLHAFDVLSEFDGSNDGSAGQMLQYAWLIGSQYKSMELAKSDWAAIKKSPPWSIDSWGMGCLIYELFSGVKLSKTEELRNTGSIPKSLLPDYQRLLSSMPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRPIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSADEFRVKVLPTIIKLFASNDRAIRVSLLQHIDQFGESLSVQVVDEQVYPHVATGFSDTSAFLRELTLKSMLILAPKLSQRTISGSLLKHLSKLQVDEEAAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEIATRILPNVVVLTIDPDSDVRSKAFQAVDQFLQMAKQYYEKTNTAEATGGAGMGMSSIPGNASLLGWAMSSLTLKGKPSDHAAPVASMSSSALTPTSSNASSGILAVETPSTAPVRVSSATDFAEQPVPTSPTSTDGWGELENGLDGPENDKDGWDDLEPLEETKPAPALANIQAAQRRPVSQPVSQSKQASSLKSKNTPRLSKDEDDDLWGAIAAPAPKTSLNLKSTTTEDDDPWASIAAPAPTTRAKPLSAGRGRGAKPAAPKLGAQRINRTSSSGM* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1648 797 PANTHER - 1 794 - -
Lja5g1648 797 MobiDBLite consensus disorder prediction 638 656 - -
Lja5g1648 797 SUPERFAMILY ARM repeat 293 551 IPR016024 -
Lja5g1648 797 SUPERFAMILY Protein kinase-like (PK-like) 37 287 IPR011009 -
Lja5g1648 797 MobiDBLite consensus disorder prediction 694 716 - -
Lja5g1648 797 MobiDBLite consensus disorder prediction 602 619 - -
Lja5g1648 797 Gene3D - 282 561 IPR011989 -
Lja5g1648 797 MobiDBLite consensus disorder prediction 596 619 - -
Lja5g1648 797 MobiDBLite consensus disorder prediction 638 679 - -
Lja5g1648 797 Gene3D Transferase(Phosphotransferase) domain 1 109 280 - -
Lja5g1648 797 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Lja5g1648 797 ProSiteProfiles HEAT repeat profile. 366 404 IPR021133 -
Lja5g1648 797 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 1 794 - -
Lja5g1648 797 MobiDBLite consensus disorder prediction 693 797 - -
Lja5g1648 797 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Lja5g1648 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1648 K08876 - gmx:100792884 1360.13