Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1642 ATGGAGTGTTGTCACTTTATGGCTCCATTTCCATTGATGTTCCTAATTACTTCATGGCTTTTACAGGCACTCCATGCCAACGCAGCAGAAAGCACCACATACATAGTTCACATGGACAAGTCCCTCATGCCTCAAGTCTTCACCACCCATCAAGACTGGTACGAGTCCACCCTTCACTCCACAAAGTTAGCATCAACAGATCAAAATTCATCCAAGCAATCACAGAAATTGGTGTACACATACAATCATGCCATGCATGGATTCAGTGCAGTCCTATCATCACATGATTTGGAGACTCTGAAGAACACACATGGCTTTGTCACTGCTTACCCTGACAAATCTGCCACCATAGATACTACACACACCTTTGAGTTTCTCTCCCTGGATCCCTCCAAGGGGCTATGGAATGCATCCAATTTAGGAGAAGGTGTAATTGTTGGTGTTATTGACAGTGGAATCTGGCCTGAAAGTGAGAGCTTCAGAGATTATGGAATGACAAACCAAATCCCATCCAAATGGAAAGGAACATGTGAGGCAGGACAAGACTTCAACACCTCCATATGCAACTTGAAGCTAATTGGAGCTAGATACTTCAACAAGGGTCTGATTGCATCAAACAGCAGCATCAAAATCAGCATGAACTCGGCTAGAGACACTCGGGGACATGGAAGTCACACATCATCCACTGTTGCTGGAAACTATGTCAATGATGCCTCTTTCTTTGGCTATGCCAAAGGTGTAGCCAGAGGAATTGCACCGCGAGCGAGGCTCGCGATGTACAAGGTCCTCTGGGACGAGGGTCGCCAAGCCTCCGACGTTCTCGCTGGAATGGACCAAGCCATCGCTGATGGGGTTGATGTTATCTCCATCTCAATGGGTTTCGATGCGGTTCCCTTGTACGAGGACCCGGTTGCAATAGCTTCTTTCGCAGCAATGGAAAAAGGGGTTTTGGTTTCATCTTCCGCTGGAAATGAAGGTCCTTCTCTAGCCACCTTGCACAATGGAATCCCCTGGCTCTTAACAGTTGCAGCAGGCACCATAGACCGCACATTCGGTAGCATAACACTCGGAAACGGTGAAACCATAGTTGGTTGGACCTTGTTTCCTGCAGAAGCCATAGTCCAAAATCTTCCACTTATTCACAACAAGACTCTCTCAGCTTGCAACTCAGTAGCACTTTTATCACAAGCAGCCAGAAGAGGGATCATTGTATGTGATTTCATAGAATCAATCTCAGTATTCACCCAAATCAGTTCCATCACCCAAGCCAGTGCGTTAGGTGCTGTGTTCATCTCAGAAGATCCAAAGCTAATCGAAACCGGCCGCGTGTTCTCACCTAGCATCGTAATCAATCCAAGAGATGCAACATCCATCCTCCGCTACGCGAAAACCGCGAAAAACCCAACCGCCAGCTTGGCATTTCAACAAACATTTGTCGGGCAAAAACCAGCACCCGCTGCAGCATACTACACTTCAAGAGGCCCATCACCCAGCTACCCAGAAATCTTAAAACCCGATGTAATGGCACCTGGAACCAACGTTCTCGCCGCATTCGTCCCAAACCAAGTCTCAGCAAGAATCGGCACCAATGTAGCCCTCTCCAGTAACTACGCTTTTCTCTCTGGAACTTCCATGGCGTGTCCTCACGCATCTGGTGTCGCTGCTTTGCTGAAATCAGCACACCCAGATTGGAGCCCAGCTGCTATAAGATCCGCATTGGTCACCACTGCAAACCCACTCGACAACACCCAGAATCCAATCAACGACAACGGGAACCCATTTCAACACGCTTCACCTCTCGCAATGGGAGCTGGTGAAATCGACCCCAACAGAGCATTGGACCCAGGTTTCATCTACGACGCCACGCCACAGGACTATGTGAGCCTCCTCTGCGCTCTGGGCTACACGCACAAGCAAATCCTAACCATCACAAGATCGAAATCATACAACTGTGATAACCCGTCTTTCGATCTGAACTACCCTTCGTTCATAGCGTTGTATGGGAACAAAACGAGGTCGATTGTGCGGAAGTTTCAGAGGGTTGTGACGAATGTGGGAGGTGGTGGTGCTAGTTACAGAGTGACGGTGGCGCAACCGGAAGGCGCGGTGGTTAAAGTGTCGCCGGAGATGCTACAATTTAGCTACGAAAATGAGAAGCTGAGTTACTCTGTTGTTGTGAAGTATACGAGGGGTAAAAAGGGAATTGTGTCGTTTGGGGATATTGTTTGGGTTGAAGACGGTGGTGCACGGCGGAGGGTTCGGAGCCCCGTCGTTGTGGCGCCAAAGTGA 2289 0.4867 MECCHFMAPFPLMFLITSWLLQALHANAAESTTYIVHMDKSLMPQVFTTHQDWYESTLHSTKLASTDQNSSKQSQKLVYTYNHAMHGFSAVLSSHDLETLKNTHGFVTAYPDKSATIDTTHTFEFLSLDPSKGLWNASNLGEGVIVGVIDSGIWPESESFRDYGMTNQIPSKWKGTCEAGQDFNTSICNLKLIGARYFNKGLIASNSSIKISMNSARDTRGHGSHTSSTVAGNYVNDASFFGYAKGVARGIAPRARLAMYKVLWDEGRQASDVLAGMDQAIADGVDVISISMGFDAVPLYEDPVAIASFAAMEKGVLVSSSAGNEGPSLATLHNGIPWLLTVAAGTIDRTFGSITLGNGETIVGWTLFPAEAIVQNLPLIHNKTLSACNSVALLSQAARRGIIVCDFIESISVFTQISSITQASALGAVFISEDPKLIETGRVFSPSIVINPRDATSILRYAKTAKNPTASLAFQQTFVGQKPAPAAAYYTSRGPSPSYPEILKPDVMAPGTNVLAAFVPNQVSARIGTNVALSSNYAFLSGTSMACPHASGVAALLKSAHPDWSPAAIRSALVTTANPLDNTQNPINDNGNPFQHASPLAMGAGEIDPNRALDPGFIYDATPQDYVSLLCALGYTHKQILTITRSKSYNCDNPSFDLNYPSFIALYGNKTRSIVRKFQRVVTNVGGGGASYRVTVAQPEGAVVKVSPEMLQFSYENEKLSYSVVVKYTRGKKGIVSFGDIVWVEDGGARRRVRSPVVVAPK* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1642 762 CDD PA_subtilisin_like 353 472 - -
Lja5g1642 762 Pfam Peptidase inhibitor I9 33 115 IPR010259 -
Lja5g1642 762 CDD Peptidases_S8_3 116 578 IPR034197 -
Lja5g1642 762 ProSiteProfiles Serine proteases, subtilase domain profile. 122 613 - -
Lja5g1642 762 Pfam Subtilase family 141 588 IPR000209 GO:0006508|GO:0008236
Lja5g1642 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 117 IPR037045 -
Lja5g1642 762 SUPERFAMILY Subtilisin-like 118 616 IPR036852 GO:0004252|GO:0006508
Lja5g1642 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 760 IPR045051 -
Lja5g1642 762 Gene3D - 630 761 - -
Lja5g1642 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Lja5g1642 762 Gene3D Peptidase S8/S53 domain 143 626 IPR036852 GO:0004252|GO:0006508
Lja5g1642 762 Gene3D - 348 480 - -
Lja5g1642 762 PANTHER OS01G0868800 PROTEIN 33 760 - -
Lja5g1642 762 Pfam Fibronectin type-III domain 657 759 IPR041469 -
Lja5g1642 762 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Lja5g1642 762 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Lja5g1642 762 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1642 Lja-Chr5 17748049 17750563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1642 29 758 Subtilisin-like Serine Gene Family AT5G67090 42.743 0.0 548