Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1633 ATGATGATGCAGATGGAGAAAAATGCACCTGAATTGATAGTGATACTTATATTACTTTTTCAACAACCCTGTCTGTGTGTCCCTTCTGAAGGGCTCAACGCAGAAGGTAAATACCTTCTGGACATAAAAGAGAGATTGTTTAACAAGAACAACACTCTTTTCAACTGGAACTCAAGTGATTACACACCTTGTGGTTGGAACGGTGTCCTCTGCAGCACTGGAATCAATCCAGTCGTGATATCTCTTAACTTACATGCAATGAACCTTTCTGGCTCTTTATCTCCCAGCATCGGTGGTTTGGTTCACTTGCACCACCTTGATCTATCTCAAAACACTTTGTTTGGGGTTATACCAATTGAAATTGGTAACTGTTCAAGTTTGGAGGTTCTTAGTCTTGACAATAATCAATTTGGAGGCCAAATTCCTGTTGAAATAGGTAACCTTTCAAATTTAACAGAATTGTATCTTTTCAACAACCAACTTTCTGGGCCTATTCCAGAGGAGATTGGCAAACTTTCCTCACTCTCAATACTTATTGTATACACCAATTATCTCAATGGATCTTTGCCAAGTTCTATTGGGAAGCTTAAAAAATTGAGACGCTTCCGCGGGGGGGAGAACATGATATCAGGAAGCCTACCTCAAGAGATAGGTGGGTGTGAGAGCTTGGAGTATCTTGGTTTGACTCTGAATCAGATAAGTGGTGAGATACCAAAGTCACTTGGACAGCTCCAGAACATTCAATATTTGGTCCTCAGGGAAAATAATCTTCATGGGGCCATACCCAAAGAGCTTGGAAACTGTTCCAGTTTGGAGGTTCTAGCTCTTTATCAGAACAATCTTGTCGAAGAAATTCCCAAGGAGCTGGGAAACCTTGCCTTGCTTAAGAGGTTGTACCTTTATAGGAATGAGTTGACAGGAAATATTCCAAGGGAGATTGGGAATCTGTCTCATGCATTGGAGATTGATTTTTCAGAGAACCTGCTCACAGGAAAGATACCTGTTGAGTTGGTTAAAATAACAGGTCTGCACTTGCTTCATCTTTTTCAGAACAAGCTAAGTGGTGTTATCCCACATGAGCTCACCAACTTGAAAAACCTGAGTGAGCTTGATCTCTCTATTAACTATCTGAAAGGTGCTATTCCTCCTGGATTTCAGAATCTGACCAACTTGACCTCTTTGCAACTATTCAACAATTCATTGAGTGGTACCATTCCTAAAGCACTTGGAGCAAATAGTCCCCTCTGGGTGCTTGATTTGTCATTCAACTACTTGGTGGGAAGAATTCCAATCCATCTTTGCCAACATGTTAACTTGGTTCTGTTGAATTTAGGATCGAACAAGTTCACTGGGAACATCCCTTACGAAATCACAAGCTGCAAGTCCTTGGTGCAGCTGCGTCTCTTCAATAACAGCCTCAGAGGAAGGTTTCCTTCTAATTTGTGCAAACTTGGAAACCTTTCTGCAGTGGAGCTGGATCAGAATGACTTCACCGGTTCCATTCCTCCGCAAATTGGAAACTGCAAAAATTTGCAAAGACTTCACCTTTCTAACAACCACTTTTTGTCTGAATTGCCAAAAGAAATTGGTAACCTCTCACAGTTGGTCACTTTCAATGTCTCATCAAATTATCTTGTTGGTAGACTGCCTAAGGAGCTCTTTTACTGCAGGAAGCTCCAAAGGCTTGATCTTAGCCATAACAATTTCTCAGGTGCTTTTCCAGGTGAGATAGGAATTCTTTCACAGTTAGAGCTTCTCAGGCTCTCACATAACAATTTTTCCGGGAATATTCCTGTGCCCATAGGAAAACTCTTGAGATTAACTGAGTTACAAATGAGTGACAACTTGTTTTCTGGTTGCATTCCACATCAATTAGGTGCACTCTCATCCTTACAAATTGCATTGAATCTCAGTTATAATAATCTCTCAGGTGAAATACCCTCTAAGCTTGGAAATCTCATCATGCTAGAATCCCTCCAACTCAACAATAACCATTTGAGTGGTAAAATCCCAGACTCCTTTGAGGAACTATCAAGTTTACTTGCCTGCAACTTCTCAAACAATGATCTCAGTGGCCCTTTACCTTCCTTACCCCTCTTTCAAAACTCCAAATTCAGCTCCTTTTCTGGAAACAAAGGACTCTGTGGAGGACATCTTGGCCCTTGCACAAATTCAGCCTCGCCCTCTTCTTCAAGTAAACTAGGGAAAATTCTGGCTATAGCTGCAGCTGTTGTTAGCGGAGTTTCTTTGGTTTTAATTGCATTCATTATACATCTCATGAGAAAACCCTTGGTGCCGCGGCAAGATACGGATAGATCATGCTCTCTACCTGTTGCAGACATGTACTTCTTCCCAAAGGAGGGGCTAACTTTCCAAGACACGGTTGAAGCTACTGAAAACTTTCATTCCAAATATGTGATTGGAAAAGGAGGTAGTGGAACTGTGTACAGAGCAGACATATCAACTGATCATACTATTGCTATTAAGAAGCTGACATCAAGCAGCAACAGCATCAACAAGGGTTGCTTCCGTGCCGAAATCTTAACTTTGGGGAAAGTGAGGCATCGGAATATTGTGAAATTATATGGTTTCTGCAACTACCGTGGCTCAAGTATGATTCTTTATGAGTACATGGAGAAGGGTAGTTTGAGGGAGTTACTTGATGGAGCAATTTGTAGTCTTGATTGGGGTGTTCGGTTTAGGATTGCTCTTGGAACTGCACATGGACTCTCTTATTTGCACCATGATTGCAAACCAAGGATTATTCACCGTGATATAAAGCCAAGTAACATACTTATTGACCATGAATTTGAAGCTCATGTTGGGGACTTTGGCTTGGCAAAGCTGATTGATATGTCATGGTCTAAATCAATGTCTGCAGTTGTAGGTTCTTACGGCTACATTGCCCCAGAGTATGCATACACAATGAAAGTCACAGAAAAATGTGATGTCTACAGCTATGGTGTTGTCCTTTTGGAATTACTCACCGGGAAGAAGCCAATACAATCGATAGATCAAGGTGGTGATCTCGTGACATGGGTGAGAAATCATATCCACAATCATTCCTTGTCAATTGACATCCTTGATGCTCGATTGGACCTGCTAGATGAAATGGATGTTGCTCAAACCTTTGATGTTTTGAAAATTGCTCTGTTCTGCACCAACTCGTGCCCTTCTAAACGCCCAAGCATGCGTGAGGTTGTGTCAATGCTTACAAGTTCTTGTAAAAGAACAGAGCAAGTCTCCTCCTCTCCATGTTCAGAATTAAGTTAG 3273 0.4137 MMMQMEKNAPELIVILILLFQQPCLCVPSEGLNAEGKYLLDIKERLFNKNNTLFNWNSSDYTPCGWNGVLCSTGINPVVISLNLHAMNLSGSLSPSIGGLVHLHHLDLSQNTLFGVIPIEIGNCSSLEVLSLDNNQFGGQIPVEIGNLSNLTELYLFNNQLSGPIPEEIGKLSSLSILIVYTNYLNGSLPSSIGKLKKLRRFRGGENMISGSLPQEIGGCESLEYLGLTLNQISGEIPKSLGQLQNIQYLVLRENNLHGAIPKELGNCSSLEVLALYQNNLVEEIPKELGNLALLKRLYLYRNELTGNIPREIGNLSHALEIDFSENLLTGKIPVELVKITGLHLLHLFQNKLSGVIPHELTNLKNLSELDLSINYLKGAIPPGFQNLTNLTSLQLFNNSLSGTIPKALGANSPLWVLDLSFNYLVGRIPIHLCQHVNLVLLNLGSNKFTGNIPYEITSCKSLVQLRLFNNSLRGRFPSNLCKLGNLSAVELDQNDFTGSIPPQIGNCKNLQRLHLSNNHFLSELPKEIGNLSQLVTFNVSSNYLVGRLPKELFYCRKLQRLDLSHNNFSGAFPGEIGILSQLELLRLSHNNFSGNIPVPIGKLLRLTELQMSDNLFSGCIPHQLGALSSLQIALNLSYNNLSGEIPSKLGNLIMLESLQLNNNHLSGKIPDSFEELSSLLACNFSNNDLSGPLPSLPLFQNSKFSSFSGNKGLCGGHLGPCTNSASPSSSSKLGKILAIAAAVVSGVSLVLIAFIIHLMRKPLVPRQDTDRSCSLPVADMYFFPKEGLTFQDTVEATENFHSKYVIGKGGSGTVYRADISTDHTIAIKKLTSSSNSINKGCFRAEILTLGKVRHRNIVKLYGFCNYRGSSMILYEYMEKGSLRELLDGAICSLDWGVRFRIALGTAHGLSYLHHDCKPRIIHRDIKPSNILIDHEFEAHVGDFGLAKLIDMSWSKSMSAVVGSYGYIAPEYAYTMKVTEKCDVYSYGVVLLELLTGKKPIQSIDQGGDLVTWVRNHIHNHSLSIDILDARLDLLDEMDVAQTFDVLKIALFCTNSCPSKRPSMREVVSMLTSSCKRTEQVSSSPCSELS* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1633 1090 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Lja5g1633 1090 PANTHER LRR RECEPTOR-LIKE KINASE 12 1082 - -
Lja5g1633 1090 SUPERFAMILY Protein kinase-like (PK-like) 778 1071 IPR011009 -
Lja5g1633 1090 Gene3D Phosphorylase Kinase; domain 1 770 877 - -
Lja5g1633 1090 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Lja5g1633 1090 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 1082 - -
Lja5g1633 1090 ProSiteProfiles Protein kinase domain profile. 801 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g1633 1090 SMART serkin_6 801 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g1633 1090 SUPERFAMILY L domain-like 51 400 - -
Lja5g1633 1090 ProSitePatterns Protein kinases ATP-binding region signature. 807 830 IPR017441 GO:0005524
Lja5g1633 1090 Gene3D Ribonuclease Inhibitor 341 413 IPR032675 -
Lja5g1633 1090 Gene3D Ribonuclease Inhibitor 34 148 IPR032675 -
Lja5g1633 1090 Pfam Protein kinase domain 802 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g1633 1090 Gene3D Ribonuclease Inhibitor 236 339 IPR032675 -
Lja5g1633 1090 Gene3D Transferase(Phosphotransferase) domain 1 878 1087 - -
Lja5g1633 1090 SMART LRR_typ_2 388 412 IPR003591 -
Lja5g1633 1090 SMART LRR_typ_2 364 387 IPR003591 -
Lja5g1633 1090 SMART LRR_typ_2 148 172 IPR003591 -
Lja5g1633 1090 SMART LRR_typ_2 292 316 IPR003591 -
Lja5g1633 1090 SMART LRR_typ_2 509 531 IPR003591 -
Lja5g1633 1090 SMART LRR_typ_2 532 556 IPR003591 -
Lja5g1633 1090 SMART LRR_typ_2 484 508 IPR003591 -
Lja5g1633 1090 SMART LRR_typ_2 100 124 IPR003591 -
Lja5g1633 1090 SMART LRR_typ_2 580 604 IPR003591 -
Lja5g1633 1090 SMART LRR_typ_2 653 676 IPR003591 -
Lja5g1633 1090 SMART LRR_typ_2 244 268 IPR003591 -
Lja5g1633 1090 SUPERFAMILY RNI-like 321 696 - -
Lja5g1633 1090 Gene3D Ribonuclease Inhibitor 150 235 IPR032675 -
Lja5g1633 1090 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Lja5g1633 1090 Pfam Leucine rich repeat 534 593 IPR001611 GO:0005515
Lja5g1633 1090 Pfam Leucine rich repeat 366 425 IPR001611 GO:0005515
Lja5g1633 1090 Gene3D Ribonuclease Inhibitor 414 726 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1633 Lja-Chr5 17532298 17536628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1633 44 1071 Receptor kinase-like Gene Family AT1G73080 38.956 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lja5g1633 Pkinase 5.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1633 - - adu:107465566 1535.39