Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1628 ATGGCTTCTCTCTCTTGCTCAGCCACAGACCTCGCTCCACTCTTAACCGCCACAACCAACGCAACCGCAACCGCCGCCGCCACCTACCTCTGCAACCAGCTCGATACAATCTCCAGGAAGCTCAGCGACACCACCTATGCCGTTGACAACACCTACCTCCTCTTCTCAGCTTATCTAGTCTTCGCCATGCAGCTCGGTTTTGCCATGCTCTGCGCCGGCTCCGTCCGAGCCAAAAACACCATGAACATCATGCTAACCAATGTTCTTGATGCAGCAGCCGGCGGCCTATCCTACTACCTCTTCGGCTTCGCGTTCGCCTTCGGAGCCCCCTCCAACGGCTTCATCGGCCGCCACTTCTTCGGCCTCAAACACTACCCTTCGCCCACCTACGACTACAGCTTCTTCCTCTACCAGTGGGCCTTCGCCATCGCCGCTGCCGGAATCACCAGCGGCTCCATCGCCGAGAGGACACAATTCGTCGCCTACCTCATCTACTCCTCTTTCCTAACCGGCTTTGTCTACCCGGTCGTCTCGCACTGGCTCTGGTCCTCGGACGGCTGGGCCAGCCCCACCCGCACCACTGGCAGCTTACTATTCGGATCCGGCGCGATTGATTTCGCTGGATCCGGAGTAGTCCACATGGTCGGTGGCATAGCAGGACTATGGGGCGCGTTCATCGAAGGCCCTAGAATCGGCCGGTTCGACCGAACCGGCCGATCCGTAGCCTTACGTGGACACAGTGCGTCCCTAGTTGTCCTCGGTTCGTTTCTACTATGGTTCGGTTGGTACGGGTTCAACCCCGGTTCATTTCTCACCATAGCAAAAGCCTACGGTAACAACGGCGAAAACGGTAATTACTACGGTCAGTGGAGCGCGATAGGGAGAACAGCGGTCACAACCACATTGGCTGGATGCACTGCGGCACTCACCACGCTTTTCAGCAAACGGTTATTGGAGGGCCACTGGAACGTGCTTGACGTGTGTAACGGCCTGCTCGGCGGTTTCGCCGCCATCACCTCCGGTTGCTCCGTCGTCGAGCCGTGGCCGGCGATTGTCTGCGGTTTCGTGGCAGCGTGGGTGCTGATCGGGCTCAATTTGGTTGCGGCGAAAATGAAGTACGACGATCCTCTGGAGGCGGCGCAGCTTCACGGCGGGTGCGGCGCGTGGGGGGTTTTATTCACGGGGCTGTTTGCGAAGGGGGAGTACGTGGCGGAGGTTTACGGCAGCGCTGGGAGGCCGTACGGGTTGTTAATGGGTGGCGGAGGGAAGTTGCTGGCGGCGCAGGTGATTGAGATATTGGTGGTGTGTGGGTGGGTTACGGCGACGATGGGGCCGTTGTTCTATGGGCTTCATAAGATGAAACTTTTGAGGATTTCTGAAGATGATGAGACTGCGGGGATGGATTTGACGAGGCATGGTGGGTTTGCTTATGCTTACCATGATGAAGATGATGTGTCCACCAAGAGAGGGGTCATGATGAGTAGGATTGGGCCTGGTAGTAGTTCTCCCTCCACCATGAACACGCCGGCGGCGAGCGCCGCCGCCAATGACTGTTGA 1557 0.5812 MASLSCSATDLAPLLTATTNATATAAATYLCNQLDTISRKLSDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLKHYPSPTYDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWLWSSDGWASPTRTTGSLLFGSGAIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRTGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLTIAKAYGNNGENGNYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLEGHWNVLDVCNGLLGGFAAITSGCSVVEPWPAIVCGFVAAWVLIGLNLVAAKMKYDDPLEAAQLHGGCGAWGVLFTGLFAKGEYVAEVYGSAGRPYGLLMGGGGKLLAAQVIEILVVCGWVTATMGPLFYGLHKMKLLRISEDDETAGMDLTRHGGFAYAYHDEDDVSTKRGVMMSRIGPGSSSPSTMNTPAASAAANDC* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1628 518 PANTHER AMMONIUM TRANSPORTER 1 508 - -
Lja5g1628 518 Gene3D Ammonium transporter AmtB like domains 25 495 IPR029020 -
Lja5g1628 518 Pfam Ammonium Transporter Family 52 477 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lja5g1628 518 ProSitePatterns Ammonium transporters signature. 205 230 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lja5g1628 518 SUPERFAMILY Ammonium transporter 46 458 - -
Lja5g1628 518 TIGRFAM amt: ammonium transporter 49 477 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lja5g1628 518 PANTHER AMMONIUM TRANSPORTER 1 508 - -
Lja5g1628 518 MobiDBLite consensus disorder prediction 497 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1628 Lja-Chr5 17478386 17480581 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1628 2 508 Inorganic Solute Cotransporters AT1G64780 79.102 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1628 K03320 K07573 qsu:112038007 802.742