Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1591 ATGAATCCTCAATATCCAAGAGTTAGGAAGGCCCTAGATGCTATGAATGCCTTAGGAGTTTCTGATGAAGAGGTAGAACCGAAGTTGAAAGATTTGCTTAGAGTGTATAAAAACTGGAAATACATTGAAGACGACAATTATCGGACGTTAATTGATGCATACTTTGAGTCAAAGGAGGCTAAGGAGCAAGCAGAATCTAAGAGAAAAGCTCCCGCTCCCAACAGTTATCATGATGGAGAAAGACCAAAACAGAGACTGCACTTGGAAGATAAAGATGACAAAGTTTTATCAACTAACAGTACAAGAAAAGTGTTATCTGTAGAAGACAGCGAAATACCACGGAGGACTTCTAAACAGGAAACCAGTAATCCATCTCGAACTTCCATGGGAGATATGAACCCCCATGTCGGTTCACTAGCATTGCAGTCAAGGTTGAGTGAGGTTGAAAGGAACACAAATTTACCTTGCTCGGCTGCTAGAGGAAAATTGTACCTTGAGGAATCATCGTCCGCAGCGCAATGTGAAGGTCCAGTTAATGAAGCTAATCCTCATAATCAGAGGAAAAATATGTCAAGTGATAATTATCAGAAGAAGCCCGTGGGATTAAGAACTGAGAATCCTAAGTATCGACATGGACCTGTTTCAACAAGTTACAGTGGCCCATCCAATGCCTCAAATGGAAATCCCCGTGTCAAATCTCTATCCGCTGAGCATCAGAATCTGCACAAGAAAGAAGATATTCCCCCATGCTATAATAACACCCGTAATGGTCATATTATTGCTTCTTCATCTCAAGGAGAAGTTAAAATGTCTTTAAATTGTGATGCTGCCTTGGCACTTCCAAACTTCCAAATTCCTAAATTGGATGATGTCATGAAGTCTGTGGAGGAGAAATATCTAAGGTCTTGCGTAGCTGTTCAGCCCCAACTATCGATGGCCAAGTTATTAAATGAATTATGTGGAAGATTTTTGAAGCTGGGCTTGAATTTAAACCGAAAGGGGACAAAACCAGAACATGCCAATTCACAAAATGTGGTATGTTTGCCACAGCAAGCTGTTGCTGAGGAAAAAACCTCCCACTTCATAAATGACATAACAAAAGGTTCAGAAAACGTTAAAATATCATTATTAGATGAAACTGGAAGTGAGGAATTGCCAAATTTTAATTACATACCTAATAATGTAATATATCAAAGTGCTAATGTAAATATTTCACTTGCACGGATTGCGGATGAGGGTTGCTGTTCTGATTGTAAAGGCAACTGTCTTTCCTTATCATTTCCTTGTGCGTGTTCTCAAGAAACTGGTGGAGAGTTTGCTTACACTCGACAAGGTTTGTTGAAAGAAGAATTTTTAGCAGTTTGCATGTCTATGAAAACGGAACCTCAAGATCATCATTTTTTATTCTGTAAAGAATGTCCACTGGAGAGGTCTAAGGATGAGAACATGCCTGGAAAATGCAACGGACATCTGGTTAGGAAGTTTATAAAGGAATGCTGGAGGAAATGTGGATGTAACATGCAGTGTGGAAATCGTGTAGTGCAACGAGGATTAAGATGTAAACTGCAGGTGTTTGTGACTGAACAAGGAAAGGGCTGGGGTGTTAGAGCCCTTGAAGATTTGCCTAAGGGATGCTTTGTTTGTGAATACGCAGGGGAGATATTAACTAATACAGAATTATATGAAAGGGTTCTCCTGAATAGCGGTAATGACAGACATACATATCCTGTAACCCTTGATGCAGACTGGGGCTCAGAAGGGGTGTTAGTGGATGAGGAAGCACTATGCTTGGATGCTACATATAATGGAAATGTTGCAAGGTTTATCAATCATAGATGCTATGATGCAAATCTAATAGACATTCCTGTTGAAGTGGAGACACCTGATCGCCACTATTATCATCTTGCCCTCTTTACAAATAAAAGTGTAAAGGCGAACGAGGAGTTGACATGGGATTATGGTATTGACTTTGATGATCATGACCATCCAATTAAAGCATTTCAATGTTGTTGTGGAAGTACCTTCTGCCGTGATAAGAAACAAAAAGGAACTGGATCATTGAAGACTAAAAAACTCAAGGATACATATGCATCCTAA 2097 0.3972 MNPQYPRVRKALDAMNALGVSDEEVEPKLKDLLRVYKNWKYIEDDNYRTLIDAYFESKEAKEQAESKRKAPAPNSYHDGERPKQRLHLEDKDDKVLSTNSTRKVLSVEDSEIPRRTSKQETSNPSRTSMGDMNPHVGSLALQSRLSEVERNTNLPCSAARGKLYLEESSSAAQCEGPVNEANPHNQRKNMSSDNYQKKPVGLRTENPKYRHGPVSTSYSGPSNASNGNPRVKSLSAEHQNLHKKEDIPPCYNNTRNGHIIASSSQGEVKMSLNCDAALALPNFQIPKLDDVMKSVEEKYLRSCVAVQPQLSMAKLLNELCGRFLKLGLNLNRKGTKPEHANSQNVVCLPQQAVAEEKTSHFINDITKGSENVKISLLDETGSEELPNFNYIPNNVIYQSANVNISLARIADEGCCSDCKGNCLSLSFPCACSQETGGEFAYTRQGLLKEEFLAVCMSMKTEPQDHHFLFCKECPLERSKDENMPGKCNGHLVRKFIKECWRKCGCNMQCGNRVVQRGLRCKLQVFVTEQGKGWGVRALEDLPKGCFVCEYAGEILTNTELYERVLLNSGNDRHTYPVTLDADWGSEGVLVDEEALCLDATYNGNVARFINHRCYDANLIDIPVEVETPDRHYYHLALFTNKSVKANEELTWDYGIDFDDHDHPIKAFQCCCGSTFCRDKKQKGTGSLKTKKLKDTYAS* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1591 698 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 692 IPR025776 -
Lja5g1591 698 MobiDBLite consensus disorder prediction 62 136 - -
Lja5g1591 698 Pfam Ubiquitin-binding WIYLD domain 7 59 IPR018848 GO:0018024
Lja5g1591 698 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 5 693 - -
Lja5g1591 698 MobiDBLite consensus disorder prediction 174 231 - -
Lja5g1591 698 MobiDBLite consensus disorder prediction 174 199 - -
Lja5g1591 698 CDD SET_SETDB-like 386 654 - -
Lja5g1591 698 Gene3D - 1 60 IPR043017 -
Lja5g1591 698 MobiDBLite consensus disorder prediction 210 231 - -
Lja5g1591 698 SMART preset_2 362 504 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lja5g1591 698 MobiDBLite consensus disorder prediction 117 132 - -
Lja5g1591 698 SMART set_7 520 660 IPR001214 GO:0005515
Lja5g1591 698 Pfam Pre-SET motif 365 512 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lja5g1591 698 ProSiteProfiles Pre-SET domain profile. 414 517 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lja5g1591 698 SUPERFAMILY SET domain 372 677 IPR046341 -
Lja5g1591 698 ProSiteProfiles SET domain profile. 520 654 IPR001214 GO:0005515
Lja5g1591 698 Gene3D SET domain 341 664 IPR046341 -
Lja5g1591 698 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 5 693 - -
Lja5g1591 698 MobiDBLite consensus disorder prediction 62 98 - -
Lja5g1591 698 Pfam SET domain 532 654 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1591 Lja-Chr5 16987883 16995688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1591 496 677 C2H2 Transcription Factor Family AT2G23740 41.176 2.54e-31 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lja5g1591 Pre-SET 9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1591 - - lja:Lj0g3v0223599.2 1252.27