Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1548 ATGGCGGATTCTTCAACCAACCCCAACAACGACCAGAAGACACGTCTCTACCATCCCTACCAAGACCTCAACGTCCCCATCCAAAAGCTCTACAACCTCCCCACCTCACCGGAGCACCTCTTCCCTGAAGAAGCCGCCAGGACCCACCGATCATGGGGCGACAATCTCCAGTTCTACACCGGCTCCGCCTACCTTGCCGGCGCCATCATCGGCGGCTCCAGGGGGACCGTTGAAGGTCTCAAAGCCGCGGAGATCGGCGAGTCGCTCAAGGTCCGGCTCAGCCGGGTTCTTAACTCGGGGGGCCAGGGCGGTCGCAGGCTTGGAAACTCGCTTGGGGTGTTGGGGTTGATCTTTGCCGGGTTGGAGAGTGGTATGATTCATCTCAGGGGTAGGGATGACTTGGTCAACAGCGCTGTTGCTGGACTTGGTACCGGAGCGCTTTACAGGGCGGCGGCGGGGCCGCGATCAGCTGCTATTGCCGGTGCTATTGGAGGAATTGCGGCGGCGGCCGCGGTTGCTGGGAAGCAAGCTTTGAAACGACATGTTCCTATTTAA 555 0.5982 MADSSTNPNNDQKTRLYHPYQDLNVPIQKLYNLPTSPEHLFPEEAARTHRSWGDNLQFYTGSAYLAGAIIGGSRGTVEGLKAAEIGESLKVRLSRVLNSGGQGGRRLGNSLGVLGLIFAGLESGMIHLRGRDDLVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVAGKQALKRHVPI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1548 184 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 2 184 - -
Lja5g1548 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 59 166 - -
Lja5g1548 184 PANTHER TIM23 2 184 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1548 Lja-Chr5 16346452 16347288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1548 3 180 Chloroplast and Mitochondria Gene Families AT1G17530 56.667 2.21e-63 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1548 K17794 - gmx:100803835 275.018