Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1531 ATGGCCTTTTCTCACACCCTGGAACCATCTTCTCCGCCTCTAGTGTTCTCAGTTAGGAGGAGAGAACCAGAGCTGGTGGCTCCGGCCGTGTCCACACCCCATGAAACCAAGCATCTATCTGACATAGATGACCAAGCTGGTCTTCGTGCCAATGTTCCCATCATACAATTCTACCGTAACGAGCCATCAATGGCAGGGAAAGACCCTGTTGACATCATAAGGAACGCGGTCGCGAAAGCGCTCGTGTTCTACTACCCGCTCGCCGGTAGGCTCAGGGAAGCTGCTGGTGGGAATCTCGTGGTGGATTGTAACGAGGAGGGGGTGATGTTCATCGAGGCTGATGCTGACATCACGTTTGAACAATTTGGTGACACTCTGAAACCTCCTTTCCCGTGCTTCCAAGAACTGCTTCATGAAGCTCCAGGATCAGAAGGTGTTGTTATAAATAGTCCAATTATACTGATACAGGTCACTCGGCTTAAGTGCGGCGGTTTCATCTTTGCTCTCCGCTTTAACCATGTCATGACAGACGGAGCCGGCATAGTTCACTTCATGTACGCCGTGGTAGAAATAGCCCGAGGCGCAAATGAACCATCAATCCTCCCCGTCTGGCAGAGGGAGCTCCTCCATGCGAGGGACCCACCACGCGTCACACACAACCACCGTGAATACGAACAGCTAACCGACGACACAATCACCGACCCCATCCTCACCGGAACAGACTTCGTGCAACAATCCTTCTTCTTCGGACCCGCCGAAATAGCCGCCATTCGCCGCCACCTCCCGCACCACCTTGACACTGAGTCCACCACATACGAGGTCCTCACATCATACATCTGGCGTTGCCGCACCAAAGCTTTACAGTTAGACCCGAGCCAAGAGGTTCGAATGATGTGCATAACCGACGCGCGTGGGAAGTTCAACCCTCCTTTCCCAACCGGTTACTACGGTAACTGTTTCGCGTTCCCTGCGGCGGTTGCCACGGCGGGGGAGCTTTGTGAGAAGCCGCTGGAGCATGCGGTGAGGCTGATTAAGAAAGCGAGCGGTGAGATGAGCGAGGAGTACATGCACTCTCTGGCGGATCTGATGGTGACTGAGGGAAAGCCCTTGTTTACTGTTGTGAGGTCATGTGTGGTGTTGGACACGACGTATGCTGGGTTTAGAGAGCTGGATTTTGGGTGGGGCAAGGCGGTGTATGGTGGGCTTGCTCAGGCTGGGGCAGGGGCTTTTCCAGCGGTGAACTTTCACGTGCCGAGTCAGAATGCGCAGGGAGAGGAAGGGATTTTGGTTTTGGTTTGCTTGCCTGCTAAGATTATGAGTGTGTTTGCCAAGGAGTTGGATGACATGCATGCTTGA 1356 0.5369 MAFSHTLEPSSPPLVFSVRRREPELVAPAVSTPHETKHLSDIDDQAGLRANVPIIQFYRNEPSMAGKDPVDIIRNAVAKALVFYYPLAGRLREAAGGNLVVDCNEEGVMFIEADADITFEQFGDTLKPPFPCFQELLHEAPGSEGVVINSPIILIQVTRLKCGGFIFALRFNHVMTDGAGIVHFMYAVVEIARGANEPSILPVWQRELLHARDPPRVTHNHREYEQLTDDTITDPILTGTDFVQQSFFFGPAEIAAIRRHLPHHLDTESTTYEVLTSYIWRCRTKALQLDPSQEVRMMCITDARGKFNPPFPTGYYGNCFAFPAAVATAGELCEKPLEHAVRLIKKASGEMSEEYMHSLADLMVTEGKPLFTVVRSCVVLDTTYAGFRELDFGWGKAVYGGLAQAGAGAFPAVNFHVPSQNAQGEEGILVLVCLPAKIMSVFAKELDDMHA* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1531 451 PANTHER BENZYL ALCOHOL O-BENZOYLTRANSFERASE 13 449 - -
Lja5g1531 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 449 - -
Lja5g1531 451 Pfam Transferase family 17 448 - -
Lja5g1531 451 Gene3D - 233 446 IPR023213 -
Lja5g1531 451 Gene3D - 15 226 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1531 Lja-Chr5 16164351 16167706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1531 18 446 Monolignol Biosynthesis Gene Families AT5G48930 30.612 2.86e-53 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1531 K19861 - gmx:100820325 663.299