Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1523 ATGATTGTTTCTAAAAGAGAAGAGCAGATTATGTTGCCTTCAGAAGGTGCAAGTGAGGTTTCAAAGTCAACTTCATTGGATTTGAACCCAGATTCCCTTGATGGATCCACACCTGGTTCCACTGATTACACTGATGTAGGGGTTGTGCCAGAGCACCAGAAGGATGAGCTTGAGCACTTGATATCAAATTTAGAGAGGGAGGTTGAGCAGCTGAGGCTCAATCAGAGGATAGTGGATGATAAGAGGAGAGAAGCATTGAGTAAGATATTGGATATCAAAGGGAGCATTCGAGTATTTTGTAGAATTCGACCAATTTTGATACCGGATAAGAGGAAAATCTCTGAACCAGTATCAGCTGGATCAGAGAGAATTCGGGTTAAGTTGGGAGGAACAAGGAAAGATTTTGAGTTTGATAAGGTTTTTCCTCAAGAATCAAGCCAAGAAAATGTTTTTGTTGAGGTTGAGCCAATTCTAAGATCTGCAATGGACGGACACAATGTGTGTGTTTTTGCTTACGGTCAAACGGGCACAGGCAAGACATTCACCATGGATGGTACAAATGAGCATCCGGGAATCATCCCCCGTGCTCTTGAAGAGCTCTTTCGTCAAGCTTCTATGGATAATTCGTCTGCATTCACTTTTTCAATGAGCATGTTGGAAGTTTACATGGGCAATGTCAGGGATCTTCTGGCTCCAAGACCTTCTGGTAGATCATATGAACCTATGACAAAGTGCAGTCTCAACATCCAAATAGATCCAAAAGGATTGGTTGAAATTGAGGGTCTCTCAGAAGTGCAAATCTCTGATTATGCTAAAGCCAGATGGTTGTACAACAAGGGCAGAAGGTTCAGATCCACCTCATGGACTAATGTCAATGAGGCATCAAGCAGGTCACACTGCTTGACAAGGATAAGCATATTTAGACGCGGGGATGCTTCAGAAGCCAAAAGCGAAATAAGTAAATTGTGGATGGTTGATCTTGGAGGCAATGAACGGTTACTGAAAACTGGAGCCAGAGGAGTAACACTTGATGAGGGCCGGGCTATCAATCTTTCTCTTTCAGCTTTAGCTGATGTCATTGCAGCTTTGAAGAGGAAGAGGGGTCATGTGCCTTACAGAAATAGCAAGCTGACACAAATACTGAGAGATTCTCTTGGTGATGGCTCAAAGGTCTTGATGCTTGTGCATATAAGCCCTTCAGAAGAAGATGTTTGCGAGACAATCTGTGCTTTGAATTTTGCAAAGAGGGCAAGAGCAGTAGAGTCCAATAAAGAAGTACAAGTGGAATTGAAGAAGCAAAAGGAAAAGAAGATTATGGAGCTTGAGGAAGATATTAAGGAAGCTGAAAAGCAACGTCAGTATTTAAGGGATCAAATACAGAATGTTGAGTTAAAGCTAAAAGAGAGTAAAAAGATATTTTCAACCACATATACTCTTCCAGAAAGGGAAGACATGGAAACCTCTATTAGCCCCAAAGATGATGTCAAAGAGGTTAATGAAACCCCTAAAGCATCTCATAAGTGTATTAAAAGAAGTTTCTCCAATTCAGTGCCTCGGTTCATGAATTCAACTGCTGCTAGTCGCCAAAGGCAAAGTGCTGCAGAACAGGAACTTATTGTGAAATCAAAAGGTTTAAGATCTGTGGTCGCTAGAAGTTCAATCCAGTTTCCATGTTCCCAATCATTAAGTTACTCAGATCTCCGCGTTAAAGCAATGCTGCGAAGTTCTCATGGAAAATCCCGGTATGCTGAAACAAATACTATTCCCACAGAAAGGCCTAAATGCAATGAGTTGGATTCGAAAGTGGTTACTCCTCGAAGCAAGATGGTTACATCATCTGATCCAAACTTGAGAGTTACATTGTGTCATCATAGAAGAAGGATGTCTAATCTGATCTAA 1899 0.4144 MIVSKREEQIMLPSEGASEVSKSTSLDLNPDSLDGSTPGSTDYTDVGVVPEHQKDELEHLISNLEREVEQLRLNQRIVDDKRREALSKILDIKGSIRVFCRIRPILIPDKRKISEPVSAGSERIRVKLGGTRKDFEFDKVFPQESSQENVFVEVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEHPGIIPRALEELFRQASMDNSSAFTFSMSMLEVYMGNVRDLLAPRPSGRSYEPMTKCSLNIQIDPKGLVEIEGLSEVQISDYAKARWLYNKGRRFRSTSWTNVNEASSRSHCLTRISIFRRGDASEAKSEISKLWMVDLGGNERLLKTGARGVTLDEGRAINLSLSALADVIAALKRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHISPSEEDVCETICALNFAKRARAVESNKEVQVELKKQKEKKIMELEEDIKEAEKQRQYLRDQIQNVELKLKESKKIFSTTYTLPEREDMETSISPKDDVKEVNETPKASHKCIKRSFSNSVPRFMNSTAASRQRQSAAEQELIVKSKGLRSVVARSSIQFPCSQSLSYSDLRVKAMLRSSHGKSRYAETNTIPTERPKCNELDSKVVTPRSKMVTSSDPNLRVTLCHHRRRMSNLI* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1523 632 Coils Coil 416 465 - -
Lja5g1523 632 MobiDBLite consensus disorder prediction 16 43 - -
Lja5g1523 632 Gene3D Kinesin motor domain 90 465 IPR036961 -
Lja5g1523 632 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 627 - -
Lja5g1523 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 460 IPR027417 -
Lja5g1523 632 Coils Coil 54 81 - -
Lja5g1523 632 MobiDBLite consensus disorder prediction 1 43 - -
Lja5g1523 632 PANTHER KINESIN-LIKE PROTEIN KIN-14D ISOFORM X1 1 627 - -
Lja5g1523 632 SMART kinesin_4 93 428 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1523 632 PRINTS Kinesin heavy chain signature 370 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1523 632 PRINTS Kinesin heavy chain signature 321 339 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1523 632 PRINTS Kinesin heavy chain signature 164 185 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1523 632 PRINTS Kinesin heavy chain signature 289 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1523 632 ProSiteProfiles Kinesin motor domain profile. 95 420 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1523 632 Pfam Kinesin motor domain 127 420 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1523 Lja-Chr5 16064578 16067800 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1523 82 420 Calmodulin-binding Proteins AT5G65930 39.535 7.87e-70 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1523 - - gmx:100785581 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1523 5 16064578 16067800 Lja5g1523 5 16064578 16067800 ECH