Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1512 ATGGAGTGCAACAAGGAGGAGGCTGAGAAGGCTAAGCAAATTGCTGAGAGCAGAATGCAAAGAGGTGAATTTGTGGAGGCACTGAAATTTGCTCTCAAGGCCAAAAGGATGTATGCTGAACTTGAAAACATTGCTCAGATCCTTACTATCTGTGAGGTTCACAATGCTGCACAGAAGAAACTCTCTGCGGCTGTCATGGACTGGTATGGGATTCTTCAGACGGAAAGATTGGCTGATGAAGCGGCAATAAAGAAACAGTACCGGAAGCTTGCGCTGCTGCTGCATCCTGATAAAAACAAGTTCCCTGGTGCAGAAGCTGCTTTCAAGTTCATTGGGGAGGCCTATAGGGTATTGAGTGACCCAGCCAAAAAAGCTTCACATGACATTAAGTATGGAGTCTTTGTGAATCTTGCAGCACCTAAGGCTCAGACCTCATCCCATCACTCAAATGGGAATGTATCAGCAGCAAATCATCAGAAGGGTTCTTATCCAAATTCCAATTGTTGGAATCCCCATCAGTTGCCGCAGACATTCTGGGCATTTTGCAAACATTGTAAAGCTAAGTTCCAATACTTCCCTAAACTCTTAAATGCAGCCTGGCTCTGTACGAACTGTTTGAAATCCTTTGCAGCTCCAACGCAGTGTCCACCAAAACCAGCCTCGGAAAGTAAAGTTGGAAAACCATGCGCTAGTGGAGTTGGTGCCCAATTTAAAGGTGAAAAGTGTAAAGGGATGAAGTCACAGACCACAGCAAATGCTGGAAGCAAGAGAATGAGGCAGTCAGCCCAAGTTTCAAGAGAAAGTTTCAACGCTGGGAATGGTGATGGTAAGAAAGATGCCAATGTTGGAGAAAATGATGTTGACCCTTCAAGACTGAATGTTAGGAGATCTTCCAGGCAAAAGCAACATGTTTCATATGTGGAATCCCCTGAAGCTGGCAAATTTCGGAGTCCTTCCAAAAAGCCACGACAAAACGGATCATTTGACACCAATGAAACTGAGAAAGAGAACGTGCCTACTGATGACAATAATGGAGCTGGTTATGCTGCTGGTGTAGTTGATCAGAACAAAGAGGTGGGAAATAAAATAAGTAGCCCACCGGATGAAACATCTTTAAGAAACAAAAGCAAATCTGAGCAATCTCAAGGAGAGAAAGTATTGGAGTCTGATCTTGATGTTAGAAGTTCAAAAGATGACAACTGCTCTCAATTGAATCCTGTGACCATTCCTGATACAGATTTCAATGATTTTGATAAGGATAAGGAAGAAGATTGTTTTGCTGTTAATCAATTCTGGGCAATTTATGATAGCACTGATGGCATGCCAAGATTTTATGCTCTTGTGAGGAAAGTGGCCACCCCTTTTAAGTTGAAGATTTCTTGGTTGGAACCTGACCCAGATGATGAAGGTGAGATAGATTGGCATGATGCAGAATTGCCTATTGCTTGTGGTAAGTTCAAACTTGGTGGTTCTGAGACTGTAACAGATCGTACTATGTTCTCTCATCAGATACAGTGCATGAAAAGAAGTTCCAAAGGTTCTTATTATATGGTATATCCCAAGAAGGGAGAAACTTGGGCACTTTTCAGAGATTGGGATATCAAATGGAGTGCTACTCCAGAAAATTATTTGAAGAATGAGATTGAATGTGTTGAAATCCTATCAGATTTTACTGAGAATGTTGGTATTGAAGTTGCTCACCTAGTCAAAGTAAACGGGTTTGTTAGTCTCTTTCAGAAAACTGAGAAGAATGGAGTCAGTATATCTTGTGTTGGACCTAATGAGCTCTACAGGTTCTCACACCGTATTCCTTCATATAAGACGACAGGTAATGAAAGGGAAGGTGTTCCAAGAGGATGTTTTGAACTTGACACTGCTGCATTGCCTACTTACTTCTTTGTCGTTGGTGATTCTGAAGATGCTGAAAGGGATCCTCAATCTTGGAAACATCACCAAAGGGACAGAACAAGTATGAACATTGGTCAACAAACTGTAGGTACTGTTGCTGCATGTTAG 2016 0.4201 MECNKEEAEKAKQIAESRMQRGEFVEALKFALKAKRMYAELENIAQILTICEVHNAAQKKLSAAVMDWYGILQTERLADEAAIKKQYRKLALLLHPDKNKFPGAEAAFKFIGEAYRVLSDPAKKASHDIKYGVFVNLAAPKAQTSSHHSNGNVSAANHQKGSYPNSNCWNPHQLPQTFWAFCKHCKAKFQYFPKLLNAAWLCTNCLKSFAAPTQCPPKPASESKVGKPCASGVGAQFKGEKCKGMKSQTTANAGSKRMRQSAQVSRESFNAGNGDGKKDANVGENDVDPSRLNVRRSSRQKQHVSYVESPEAGKFRSPSKKPRQNGSFDTNETEKENVPTDDNNGAGYAAGVVDQNKEVGNKISSPPDETSLRNKSKSEQSQGEKVLESDLDVRSSKDDNCSQLNPVTIPDTDFNDFDKDKEEDCFAVNQFWAIYDSTDGMPRFYALVRKVATPFKLKISWLEPDPDDEGEIDWHDAELPIACGKFKLGGSETVTDRTMFSHQIQCMKRSSKGSYYMVYPKKGETWALFRDWDIKWSATPENYLKNEIECVEILSDFTENVGIEVAHLVKVNGFVSLFQKTEKNGVSISCVGPNELYRFSHRIPSYKTTGNEREGVPRGCFELDTAALPTYFFVVGDSEDAERDPQSWKHHQRDRTSMNIGQQTVGTVAAC* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1512 671 PANTHER - 367 639 - -
Lja5g1512 671 MobiDBLite consensus disorder prediction 243 270 - -
Lja5g1512 671 MobiDBLite consensus disorder prediction 241 407 - -
Lja5g1512 671 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 367 639 - -
Lja5g1512 671 PANTHER - 1 358 - -
Lja5g1512 671 CDD DnaJ 67 120 IPR001623 -
Lja5g1512 671 Pfam DnaJ domain 67 128 IPR001623 -
Lja5g1512 671 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 358 - -
Lja5g1512 671 MobiDBLite consensus disorder prediction 372 397 - -
Lja5g1512 671 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lja5g1512 671 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lja5g1512 671 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lja5g1512 671 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lja5g1512 671 MobiDBLite consensus disorder prediction 279 295 - -
Lja5g1512 671 Pfam Domain of unknown function (DUF3444) 407 612 IPR024593 -
Lja5g1512 671 Gene3D DnaJ domain 52 149 IPR036869 -
Lja5g1512 671 SUPERFAMILY Chaperone J-domain 63 130 IPR036869 -
Lja5g1512 671 SMART dnaj_3 66 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1512 Lja-Chr5 15924837 15927861 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1512 4 217 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.234 5.83e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1512 - - lja:Lj5g3v1427900.1 1361.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0248 1 2128060 2132641 Lja5g1512 5 15924837 15927861 PCT