Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1495 ATGAAGGGGTTGTGTTCTGGGGTGGTGGTGTTGCTGGTGACCAAGTTCCAGAGTACCAAGATTCTAACATTTAGTGAAGACTTGTTCTTCCTTTACTTGCTTCCTCCCATCATTTTCAATGCTGGTTTCCAAGTCAAGAAGAAACAGTTCTTTAAGAATTTCACAACTATACTGCTGTTTGGGGTCCTGGGAACTGTTATTTCATTCTGTCTCATATCAGCTGGTGCCTTTCTGCTCATGACTAGGATTGGCATAGCTGACCTGGGCATAAAAGATCACCTAGCCATTGGTGCCATATTATCAGCAACTGACTCAGTCTGTACATTGCAGGTTCTGAGCCAAGATGAAACGCCTTTGCTTTACAGCATTGTATTTGGAGAGGGAGTAGTGAATGATGCTATCACCATCAATGCTATTACAGCCTTGAAATTATTGGGGACCTTCCTTTACCTCTTTTTCACTAGTACTGCCCTTGGCACAGGAGTTGGTCTTTTAAGTGCTTATATAATTAAAACACTTTACTTCGGAAGGCACTCCACAGATCGTGAAGTTGCACTTATGATGTTGATGGCATACTTGTCATACATGATCGATGAGCTTCTGAACCTCAGTGGGATTCTGACTATTTTCATCTGTGGCATTGTTATGTCACACTACACATGGCACAACGTTACAGGAAGCTCGAGGACAACAACCAAGCATGCCTTTGCAACTATCTCATTCATTGCTGAAACCTTTATATTTCTGTATGTTGGCATGGATGCTTTAGACATTGACAAATGGAAAACAAGCAAAGCCAGCATAGGAACTTCTGTTGCTGTTAGTTCAACATTGATTGTGTTAGTGCTGATTGGAAGAGCAGCTTTTGTTTTCCCTATTGCAAGCATTACAAATTGCATCAAGGGAAGAGGGAGTACCAAAATTGAGTTTCGAAGGCAGTTTATAATATGGTGGGCAGGCCTAATGAGAGGTGCAGTGACTATTGCCTTGTCTTATAACCAGTTTGGAGAATCCAAGAAAACATCAGCTCAAGGCTCTGCATTAATGATCACATCTACTATAATAGTAGTCTTATTCAGCACTGTGGTATTTGGTTCCATAACAAAGCCACTGATTGAGGCAGTGCACCTAAGGCATTCAAAACCAGCAATTTCTGAGTCCACTGACAATCCAGAAGATCTGAGATTTCTATTCCTTGAAAACAATGATTCGATTAACCAAAGCAACGATCAGCGATCACACAGGCGAAGTAGCCTGAGTTTGCTAATACGTCATCCCGGTACAACAGTTCACTACTTTTGGAGGAAATTTGATGATAAGTTTATGAGACCTGTTTTTGGTGGAAGGGGTTTTGTTCCTGTTGTACCTGGTTCTGAAGAGGAGATTTCTCAGAGATAA 1398 0.4142 MKGLCSGVVVLLVTKFQSTKILTFSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTTILLFGVLGTVISFCLISAGAFLLMTRIGIADLGIKDHLAIGAILSATDSVCTLQVLSQDETPLLYSIVFGEGVVNDAITINAITALKLLGTFLYLFFTSTALGTGVGLLSAYIIKTLYFGRHSTDREVALMMLMAYLSYMIDELLNLSGILTIFICGIVMSHYTWHNVTGSSRTTTKHAFATISFIAETFIFLYVGMDALDIDKWKTSKASIGTSVAVSSTLIVLVLIGRAAFVFPIASITNCIKGRGSTKIEFRRQFIIWWAGLMRGAVTIALSYNQFGESKKTSAQGSALMITSTIIVVLFSTVVFGSITKPLIEAVHLRHSKPAISESTDNPEDLRFLFLENNDSINQSNDQRSHRRSSLSLLIRHPGTTVHYFWRKFDDKFMRPVFGGRGFVPVVPGSEEEISQR* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1495 465 Pfam Sodium/hydrogen exchanger family 5 373 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja5g1495 465 Gene3D - 89 140 - -
Lja5g1495 465 PANTHER SODIUM/HYDROGEN EXCHANGER 4 460 - -
Lja5g1495 465 PANTHER SODIUM/HYDROGEN EXCHANGER 4 460 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lja5g1495 465 PRINTS Na+/H+ exchanger signature 57 65 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lja5g1495 465 PRINTS Na+/H+ exchanger signature 42 56 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lja5g1495 465 PRINTS Na+/H+ exchanger signature 97 107 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lja5g1495 465 PRINTS Na+/H+ exchanger signature 28 39 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1495 Lja-Chr5 15769804 15773897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1495 3 465 Antiporters AT3G05030 60.206 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1495 K14724 - qsu:112009828 670.618