Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1469 ATGACCACCATTAACGTGAAAATCGAAGATTCAGAAGATCAAACCATGCAAATTCAAATGCTGGCACAGAAATTTCATCTTCTTGACTGCGAACTCAAACAATTGACAACCGCTCACTCTTCAGATAATAGTGTATCAAAGCAAGTGAACGAGAATTCTGACTCCATGGATGAAATTGAAAACAGTATGTCCAATGGAACCCATGAAATTTCTCCGGATCGGGATCACACCCTTCCGATTCTCAAGAAAATCTTTGATCTGAGTTCCAAAATTCAGGATTTGAAGAAGCAGCACATAGACTTGTCTGATGAAGTCAAACAAGCAACTGGATCCTTTCCAGGCCTTGATGTTGCTTTGAACTCTATTAAGCTACTTGGTGATGAATATGAACTCTTGAAAAGAAAATACCTGGAGGAATCCTCTGAGCGTAGGCGCCTTTACAATGAAGTTATTGAACTCAAGGGAAATATCAGGGTTTTCTGCAGATGCAGGCCATTAAGTGGGAGTGAAATCGCAAACGGGTCTGCCTCAGTTGTCAATTTTGAATCATCTTTAGATAATGAGCTTCAAATCATTTGCTCAGATTCTTCAAAGAAGCAATTTAAATTTGATCATGTATTTAGACCTGAAGATAACCAAGAGGCTGTTTTTGCACAGACAAAACCTGTTGTTACATCAGTACTGGATGGATATAATGTTTGCATATTTGCCTATGGGCAAACTGGAACTGGTAAAACGTTTACAATGGAGGGAACACCAGAGCACAGGGGAGTCAACTACAGAACCCTGGAGGAATTATTTCGGACAACTGAAGAGAGAAAAGGCGTGATGAAGTATGAATTGCATGTCAGCATGTTGGAGGTTTACAATGAGAAGATTAGAGATCTTTTGGTGGAAAGTTCTACCCAGCCTTCTAAGAAATTGGAGATAAAGCAAGGTGCAGAAGGAACTCAAGAAGTCCCAGGACTTGTTGAAGCTCCTGTTTATGGAACAGAAGACGTATGGGAATTGCTTAAGACTGGAAATCTAGCTAGATCTGTTGGATCCACCTGTGCTAATGAGCTTAGCAGCCGTTCTCATTGCTTGTTGCGAGTAACTGTTAATGCGGAGAATCTAATCAATGGCCAGAAAACAAAGAGTCACCTTTGGCTTGTAGACTTGGCTGGAAGCGAGCGTGTGGGAAAAACTGAAGCTGAAGGAGAAAGATTGAAAGAATCTCAATTTATAAATAAGTCTCTTTCAGCACTGGGTGATGTTATTTCAGCCCTTGCTTCCAAATCAGCCCACATCCCTTACAGGAACTCGAAGCTCACTCACATGCTGCAGAGCTCTTTAGGAGGAGATTGCAAAACGTTAATGTTTGTCCAGGTGAGTCCAAGCGATGCAGACGTAGGAGAGACACTTTGTTCTTTGAATTTTGCCACCCGTGTCCGTGGAATTGAGAGTGGCCCAGCTCGCAAGCAAGTAGACCTCACTGAGCTGTTTAAGTACAAGCAAATGGCAGAGAAGCACAAACATGACGAGAAGGAATTTAAGAAATTACAGGAGAGCTTGCAAACCTTGCAACTCAGACTTGCTGCAAGAGAACACCACTGTAAAAACCTTCAGGAAAAGGCTCGGGACCTTGAGAACCAGTTAGCTGAAGAAAGAAAAACCAGAATGAAGCAAGAAAGTAGATCAGTTGCTGCTGTTTCAGCTCAGCCCTCATCATTCAAACAAACAGCAGCTAATAGAACCATGACAGATAAGAAGCCACCCCTGAATTCTTCAAAAATGAGACTGCCACTTAGAAGAATAACCAATTTCTTGCCTCCACCATCTCCTCGACCATCAAAGAGATATACGCCTTCCATGAATGGAAAGGAAAACTCTGCCAGAAGGACCTCAATGACAGAAAATATGGATGGCAGTTATGCAAAACCAAGAAGCAGGGCATCCTTTGCCATGAGACCACCTGCACCATCAACATCCCAGCTTCTTCAGCCAAGGAGAAGGGTCTCCATTGCTACACTCCGTCCTGACAAACCTTCTGACATAACAACTCCACTCCATACCTCAACCTCCCAACCGCCTGCACCATCAACATCCCAGCTTCTTCAGCCAAGGAGGAGGGTCTCCATTGCTACACTTCGTCCTGACAAACCTTCTGACATAACAACTCCACTCCACACCTCAGCCTCCCAATTTACCAGTGGAAGCGGCATGTCACTGATAAGGAACCAAAGGAAGGGACGGTATTCAAGTTTGTTCGCCCCATTGCCGGAGTCGAGAGCATCTGTTGAGACCACACCTATTTCTGTTAGGAGAAGCAGCAGCAAGTTTTATGGGAGTCCAGCGGCAAGCTCACGGGTGGGTAGGAATCCAACTCTCATTGCCCTGCACCGGAAATCTTTTGTCTGGAGTCCTCTCAAGTTGAAAACTAACCGAAAGTCATCATCACTCTTGCCATCTCAAATACAGTAA 2463 0.4377 MTTINVKIEDSEDQTMQIQMLAQKFHLLDCELKQLTTAHSSDNSVSKQVNENSDSMDEIENSMSNGTHEISPDRDHTLPILKKIFDLSSKIQDLKKQHIDLSDEVKQATGSFPGLDVALNSIKLLGDEYELLKRKYLEESSERRRLYNEVIELKGNIRVFCRCRPLSGSEIANGSASVVNFESSLDNELQIICSDSSKKQFKFDHVFRPEDNQEAVFAQTKPVVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRTTEERKGVMKYELHVSMLEVYNEKIRDLLVESSTQPSKKLEIKQGAEGTQEVPGLVEAPVYGTEDVWELLKTGNLARSVGSTCANELSSRSHCLLRVTVNAENLINGQKTKSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHMLQSSLGGDCKTLMFVQVSPSDADVGETLCSLNFATRVRGIESGPARKQVDLTELFKYKQMAEKHKHDEKEFKKLQESLQTLQLRLAAREHHCKNLQEKARDLENQLAEERKTRMKQESRSVAAVSAQPSSFKQTAANRTMTDKKPPLNSSKMRLPLRRITNFLPPPSPRPSKRYTPSMNGKENSARRTSMTENMDGSYAKPRSRASFAMRPPAPSTSQLLQPRRRVSIATLRPDKPSDITTPLHTSTSQPPAPSTSQLLQPRRRVSIATLRPDKPSDITTPLHTSASQFTSGSGMSLIRNQRKGRYSSLFAPLPESRASVETTPISVRRSSSKFYGSPAASSRVGRNPTLIALHRKSFVWSPLKLKTNRKSSSLLPSQIQ* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1469 820 CDD KISc_C_terminal 154 481 - -
Lja5g1469 820 Pfam Kinesin motor domain 162 480 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1469 820 PRINTS Kinesin heavy chain signature 230 251 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1469 820 PRINTS Kinesin heavy chain signature 381 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1469 820 PRINTS Kinesin heavy chain signature 350 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1469 820 PRINTS Kinesin heavy chain signature 430 451 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1469 820 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 514 IPR027417 -
Lja5g1469 820 SMART kinesin_4 154 488 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1469 820 Gene3D Kinesin motor domain 151 515 IPR036961 -
Lja5g1469 820 ProSitePatterns Kinesin motor domain signature. 380 391 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja5g1469 820 Coils Coil 497 559 - -
Lja5g1469 820 PANTHER KINESIN-RELATED 95 686 IPR027640 GO:0003777|GO:0007018
Lja5g1469 820 PANTHER KINESIN-LIKE PROTEIN KIN-14S 95 686 - -
Lja5g1469 820 Coils Coil 91 111 - -
Lja5g1469 820 MobiDBLite consensus disorder prediction 650 664 - -
Lja5g1469 820 MobiDBLite consensus disorder prediction 550 734 - -
Lja5g1469 820 ProSiteProfiles Kinesin motor domain profile. 156 480 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja5g1469 820 MobiDBLite consensus disorder prediction 613 636 - -
Lja5g1469 820 MobiDBLite consensus disorder prediction 718 734 - -
Lja5g1469 820 MobiDBLite consensus disorder prediction 679 703 - -
Lja5g1469 820 MobiDBLite consensus disorder prediction 558 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1469 Lja-Chr5 15542244 15546491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1469 122 516 Calmodulin-binding Proteins AT5G65930 40.150 3.75e-78 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1469 K10406 - gmx:100788477 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1469 5 15542244 15546491 Lja5g1469 5 15542244 15546491 ECH