Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja5g1465 | ATGGCACCGACAAAGAAATCTAGAAGTGTGAATAAGCGGCTTTCAAATTCAAATGATCTTTCTCCTGAGAAAGATGGAGTTAATTCAAATAAATACAAGCTACGGAAGAAAAAGTTGTCTGATAAATTGGGATCTCAGTGGAGCAAAGAGGAACTACAGCGATTTTATGAAGCATACAGGAAGTATGGGAAAGAGTGGAAGAAGGTGGCATCGGCTGTACGTAATAGATCCATTGAAATGGTGGAAGCTCTTTACAATTTAAATCGGGCATACTTATCTCTGCCAGAAGGGACAGCTTCTGTTGTTGGCCTCATTGCAATGATGACAGATCATTATAGTGTGCTGGATGGGAGTGATAGTGAAAGGGAGAGGAATGAAGCATCGGAATCTCGAAAACCTGTAAAGCGAAAGCGTGAGAAAGTTCAGCTTAGTGTCTCAAAAGATCCTCTCCAGGCTCAGACAATTTCTTCCAGTGATGGTTGTCTCTCTCTATTGAAGAAGAGACGCCTTGATGGTATCCAGCCCCGTGCTGTTGGGAAAAGGACACCCCGTGTCCCAGTCTGCTACTCGTATAGGAAAGATGATAGAGAAAATTATGTTTCACCAAATCAAAGAAGCCTGAAAGCAAATGCTGATGCTAGTGATGATGAAGTTGCACATGTAGCTTTGGCATTAACCAATGCTGCACAAAGAGGGGGCTCTGCCCTAGTTTCTAAAACACCACAAAGGAGAGCAGAGCAAAACTTCTCTCCTGTCCAGAGCTGGGAAAGAATGCACCAAATATCGGCGACAGCTCGGGCTAAGTTTCATGATGTTTCTGTGGATGGAGCGTTTTTGGAAGGAAGTATAGAAAGAAGGGGAGCTGAAAATGGAGAATATGTTAGGGATACTAGTTTCTTGACTGATATGAAAGGAATGAACAGGGTTGATGTTCTTCAGAAAGGGGGGAAATTGTACAAAAAGAAAGAGAAAGTGGAAAATGCTGTACACTATCAGCTTGATGATGGTGTAGAATCATGTAGTGGCACTGAGGAAGGACTTAGCAGTAGTTCTTTGAAGGAAAAAGTTGATCTTGAGGTTACTAATGAGAAACTTGAGCAATTCCCTTCAAGAAGTCAGAGGAAAAGAAGCAAGAAACTCTTCTTTGGAGATGAAATCCCTGCCTTGAATGCTCTGCAAACTTTGGCTGATCTGTCTCTAATGATGCCAACATCTACAATAGAATCTGAATCATCTTCCCTGTTGAAGGGAGAAAGAATGACTGTTGATAAAGATGGCAAGTCTGTTTTACCTGAAGCAACATCAAAAAGTAATAAGAAAAAAAAACTTAAACTCTGTGTGGCCGAGGGAGTTGAGGCTTCAACCACCAAAAAATCTAAACTCGGAAAGGACTCAGCAAATGATACTAATGCTATTTCTGAATCAAAAGAGCAGGTTCCCTTTGCTGATAGAAAATGGAAAAGAAAGCAGAAGTCCCCGATTTCTAAGGCTGTAGAGGGTGAAAACAAACCAGTGATTAAAAGAAAACAAAATGTTCAGGTTTTTGCCCTACCAAAACAATTGAAGACAGTCAAATCACCAGAGAATTCCTTGTGTAGTGATCAGAAAGATTTGGAAGTATCAACTGAAGAAATTCCACTTTTGAATGAAGTTGGTTTAAGTAAACAAAGAAGACTTAAGATGAGTTTACAGAGAACACTCAGGCCTAAAGAGAAGTCTTCTGAGAATATATTGAAAAGTCAACGTAATAAGCACTCCACCCAAAAGGAAAAGCTTTCTAATTGCTTGTCATCTCCTATGGTTCGTAGATGGATTACTTTTGAATGGTTTTATAGCGCAATTGATTATCCATGGTTTGCCAAAAGGGAATTCATTGAGTACTTAAATCATGTTGGATTAGGAAATACCCCAAGGTTAACTCGTGTTGAGTGGAGTGTCATAAAAAGTTCCCTTGGCAAACCTCGCAGGTTTTCTGAACACTTCCTACGTGATGAAAGACAAAAACTTCAACAGTATCGTGAATTAGTGAGGAAACATTATACTGAGCTACGGATTGGTGTTAGAGATGGACTTCCAACAGATTTAGCAACACCACTATATGTTGGACAGCGAGTAATTGCTCTTCACCCAAAAACAAGAGAGATTCATGATGGTAGTGTGCTTACAGTGGACCATGACAAGTGCAGGATTCAGTTTAACCGTCCTGAACTTGGCGTTGAATTTGTCATGGACATTGATTGTATGCCTTTAAATCCATCAGATAATATGCCAGAAGCTCTAAGGAGACAGATTGGTGTGAGAAAATCCCCTTTTATGACTAAAGAATCACAGATTAATGGAAATTCACGTTTTGGGGGTTGTGAAAAGCATGCTTCACCTGTGAAGGAAAAGGTTGCTATCATTGATAACCTCTGTGTACAAGCAGCTTGTGCTCAACCGTGTAAAGTGACGCAGCATCAAGCTAAGGAAGCTGATATAAATGCACTTTCTGAACTAAAGAGTGCTCTAGATAAGAAGGAGACACTGTTAATGGAGCTTGGAAATGCAAATAACAACTTATTAGAAAACCAAAATGGTGTGGAATGCTCTAAAGATTCTGAGGCTTTCAAGAAGCATTATGCCATGGTACTTGTAGAGCTAAAGGAAGCCAGTGGACAGGTTTCCCAAGCTACGGTTCAATTGAGGCAACGCAATACTTACACAGGAAACTCTCTGCCACCAAGGATGGATCCCCAAGCAAGCTGCAATATTCACAATCATCTTTCCAGTGCATTGGATAGTTCTCTAGCACAAGAATTAGGGTCAACTGTCATTGAAATCATGAAAGGATCCAGGCTAAAGGCACATGCAATGGTGAATGCTGCATGTCAGGCATTATCATTGACAAAGGAAGGTGAAGATGCTTTTGTGCGGATTGGGCAGGCATTAGATTCTATTGATTATCAGCGATTAGCCTCCAACTCCAAGCTACCTGTGATCAGGTCACAAGATCAAGTGAATGGCACTTATTATAATCGGTCTATTTATTGTGCACCAGAGCCTTTACTCAATGATGCATCTGGACCAAAAGTGCACAATGATTCTGACAAAGTTGATATGGATGTTCTGTCAGATCTCATCACTTCATGTGTTGCTACATTAATCATGATACAGACTTGTACTGAGCGCCAATACCCTCCAGCCGATGTGGTTCAGATATTAGATTCTGCTGTTACAAGCCTGCGTCCATGCTGTCCTCAAAACTTTCCAATTTACAGAGAAATTCAAATGTGCATGGGAAGAATTAAGACCCAGATTTTAGCTCTCATCCCTACTTGA | 3318 | 0.4063 | MAPTKKSRSVNKRLSNSNDLSPEKDGVNSNKYKLRKKKLSDKLGSQWSKEELQRFYEAYRKYGKEWKKVASAVRNRSIEMVEALYNLNRAYLSLPEGTASVVGLIAMMTDHYSVLDGSDSERERNEASESRKPVKRKREKVQLSVSKDPLQAQTISSSDGCLSLLKKRRLDGIQPRAVGKRTPRVPVCYSYRKDDRENYVSPNQRSLKANADASDDEVAHVALALTNAAQRGGSALVSKTPQRRAEQNFSPVQSWERMHQISATARAKFHDVSVDGAFLEGSIERRGAENGEYVRDTSFLTDMKGMNRVDVLQKGGKLYKKKEKVENAVHYQLDDGVESCSGTEEGLSSSSLKEKVDLEVTNEKLEQFPSRSQRKRSKKLFFGDEIPALNALQTLADLSLMMPTSTIESESSSLLKGERMTVDKDGKSVLPEATSKSNKKKKLKLCVAEGVEASTTKKSKLGKDSANDTNAISESKEQVPFADRKWKRKQKSPISKAVEGENKPVIKRKQNVQVFALPKQLKTVKSPENSLCSDQKDLEVSTEEIPLLNEVGLSKQRRLKMSLQRTLRPKEKSSENILKSQRNKHSTQKEKLSNCLSSPMVRRWITFEWFYSAIDYPWFAKREFIEYLNHVGLGNTPRLTRVEWSVIKSSLGKPRRFSEHFLRDERQKLQQYRELVRKHYTELRIGVRDGLPTDLATPLYVGQRVIALHPKTREIHDGSVLTVDHDKCRIQFNRPELGVEFVMDIDCMPLNPSDNMPEALRRQIGVRKSPFMTKESQINGNSRFGGCEKHASPVKEKVAIIDNLCVQAACAQPCKVTQHQAKEADINALSELKSALDKKETLLMELGNANNNLLENQNGVECSKDSEAFKKHYAMVLVELKEASGQVSQATVQLRQRNTYTGNSLPPRMDPQASCNIHNHLSSALDSSLAQELGSTVIEIMKGSRLKAHAMVNAACQALSLTKEGEDAFVRIGQALDSIDYQRLASNSKLPVIRSQDQVNGTYYNRSIYCAPEPLLNDASGPKVHNDSDKVDMDVLSDLITSCVATLIMIQTCTERQYPPADVVQILDSAVTSLRPCCPQNFPIYREIQMCMGRIKTQILALIPT* | 1106 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja5g1465 | 1105 | MobiDBLite | consensus disorder prediction | 459 | 500 | - | - | |
Lja5g1465 | 1105 | MobiDBLite | consensus disorder prediction | 116 | 144 | - | - | |
Lja5g1465 | 1105 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Lja5g1465 | 1105 | Pfam | Myb-like DNA-binding domain | 45 | 81 | IPR001005 | - | |
Lja5g1465 | 1105 | ProSiteProfiles | SANT domain profile. | 42 | 77 | IPR017884 | - | |
Lja5g1465 | 1105 | Pfam | DIRP | 609 | 710 | IPR033471 | - | |
Lja5g1465 | 1105 | PANTHER | PROTEIN ALWAYS EARLY 1-RELATED | 1 | 1105 | IPR028306 | - | |
Lja5g1465 | 1105 | SMART | DIRP_2 | 610 | 711 | IPR033471 | - | |
Lja5g1465 | 1105 | ProSiteProfiles | Myb-like domain profile. | 45 | 77 | IPR001005 | - | |
Lja5g1465 | 1105 | Gene3D | - | 4 | 99 | - | - | |
Lja5g1465 | 1105 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Lja5g1465 | 1105 | MobiDBLite | consensus disorder prediction | 565 | 589 | - | - | |
Lja5g1465 | 1105 | SUPERFAMILY | Homeodomain-like | 42 | 90 | IPR009057 | - | |
Lja5g1465 | 1105 | MobiDBLite | consensus disorder prediction | 116 | 145 | - | - | |
Lja5g1465 | 1105 | SMART | sant | 43 | 91 | IPR001005 | - | |
Lja5g1465 | 1105 | MobiDBLite | consensus disorder prediction | 478 | 500 | - | - | |
Lja5g1465 | 1105 | MobiDBLite | consensus disorder prediction | 565 | 591 | - | - | |
Lja5g1465 | 1105 | CDD | SANT | 47 | 81 | IPR001005 | - | |
Lja5g1465 | 1105 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 39 | 77 | IPR017930 | - | |
Lja5g1465 | 1105 | Coils | Coil | 829 | 856 | - | - | |
Lja5g1465 | 1105 | PANTHER | LIN-9 | 1 | 1105 | IPR010561 | GO:0006351|GO:0017053 | |
Lja5g1465 | 1105 | Coils | Coil | 662 | 682 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja5g1465 | Lja-Chr5 | 15498572 | 15512514 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Lja5g1465 | DIRP | 1.3e-30 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja5g1465 | - | - | lja:Lj0g3v0057329.1 | 1899.4 |