Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1450 ATGGCTGATTTTCTCACCTCTACCCACCGGGCCAAGTGGATCTTTTCTCCCCAGCAACTGGTTGAGAAATATAAAGCTGCTAACCAGAGGGCCAAGCAAATCCTAGAGAAGTGTGGTGCAACTCTGATGGACGTAGATATCGATGGGACATTGTCGTATCCTGAACCCCAGTTGACTTCAAAGGATAATGCTGAAAAGCATTCTCGAGTAAAACCTCTAAGTATTGAAGAAGAACAATGTATAAAGGTATTTTATGAAAACAAGCTACAAGAAGTATGCAACAATTTCCACTTCCCTCATAAAATTCAGGCAACAGCCCTCATCTATTTTAAAAGGTTCTATCTGCAATGGTCGGTGATGGAACATCAACCAAAAAATATAATGTTGACCTGTATATATGCTGCTTGTAAGATAGAAGAAAATCATGTATCAGCTGAGGAGCTTGGAAAGGGGATTTCACAGGATCATCAAATGATTCTCAATAATGAGATGATAGTCTATCAGAGTTTGGAATTTGATCTTATTGTTTATGCACCATATCGATCAGTTGAAGGTTTTATGAATGATATGGAGGAATTTTGCAATGCTGGTGACGCCCAGCTTCAAATGCTCAAGACTTTGCAAGATACAGCAAAGCTGGAAGTTGATAAAATGATGCTTACAGATGCACCGCTCTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCATTGCGCAACTCAAATGCACTCCATAAAGTTGTTGACTTTGATAGTTATCTGAGGAGCATTTTTTCCCGTCAGAACTCCATGCATACGATGTCTGAGCTTATAGAATCATTCAATGCAATAGATTCTTGGGTTAGAAAATACAAAACTCCTTCAGAGAAGGAATTAAAGCACATCAATAGGAAACTGAAGTCTTGTTGGGGTCATGGGTCTCACGACGAGAGCAAGAAGCGCGAGAAGAAATCAAAGCACAAGTCCAAAAAGAGCTCACATGAAGCACAAAATGTGCCATCTCATGTTTAG 1008 0.4028 MADFLTSTHRAKWIFSPQQLVEKYKAANQRAKQILEKCGATLMDVDIDGTLSYPEPQLTSKDNAEKHSRVKPLSIEEEQCIKVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMEHQPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSVEGFMNDMEEFCNAGDAQLQMLKTLQDTAKLEVDKMMLTDAPLLFPPGQLALAALRNSNALHKVVDFDSYLRSIFSRQNSMHTMSELIESFNAIDSWVRKYKTPSEKELKHINRKLKSCWGHGSHDESKKREKKSKHKSKKSSHEAQNVPSHV* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1450 335 CDD CYCLIN 89 167 IPR013763 -
Lja5g1450 335 SUPERFAMILY Cyclin-like 65 176 IPR036915 -
Lja5g1450 335 Gene3D - 63 175 - -
Lja5g1450 335 MobiDBLite consensus disorder prediction 296 335 - -
Lja5g1450 335 Pfam Cyclin C-terminal domain 179 301 IPR031658 -
Lja5g1450 335 SMART cyclin_7 87 168 IPR013763 -
Lja5g1450 335 Pfam Cyclin, N-terminal domain 89 174 IPR006671 -
Lja5g1450 335 Gene3D - 177 282 - -
Lja5g1450 335 PANTHER CYCLIN-H 1 331 - -
Lja5g1450 335 SUPERFAMILY Cyclin-like 179 304 IPR036915 -
Lja5g1450 335 PANTHER CYCLIN 1 331 IPR043198 GO:0006357|GO:0016538
Lja5g1450 335 MobiDBLite consensus disorder prediction 296 312 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1450 1 280 Core Cell Cycle Gene Families AT5G27620 65.000 4.79e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1450 K06634 - gmx:547736 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1450 5 14613471 14618412 Lja5g1450 5 14613471 14618412 ECH