Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1435 ATGACTTTTAGTTGGAAGAAGAAAATGGGAAGAAGCTTTTGTGGCTTTGAGCTTCTTACCATGATCTTGATCATCATCACTACACTCTTGGTGCTGCTATCATCACAAAGAACCCACATTTTGTCTGTGGATGATTTAATGAATGCAGTTGGAAGCTTCAACTTTCATGGCCTGCAACAACCACAGATGTATGAGGAGAATGAACAAGGAAGAGAAAACAAGGTGAAGAAAATTTCAGGACTTGATGAGAATGAAGAGAAGCAAGCTTTTATAGTGGAAAAAGTAAGATCTTTGCTTGGTCTAAGGAGTTTTCATGCCAGAAAACCATCCAATGGAGACTCTCAGTTTCTTCCTCCATCACCTTCTCCATCACCTGCTCCTGCTCCTTCTCCTGTGCTGCACCTGCATCCTCATTCTCATCATAAGCAACACCATTTTCATAGGAACCTTCCACCTAAGAAAACTCATGGTGGAGATAGAGACAGAGCTAAGAGAATACTAGTAGCTGTTCTTGTTTCTGTGGGTGTTGCTGCATTGGTTGGTGCTTTTGTGTCAATCTTTTTCTGCTGGAAATTCACAAATCACAGAAAGAAGCCCAAGAGGACAATGCCACTCTGCAGCAGCAAGAACAAAGAAGCAAAGGTGAGTTCATCAAACTCAGGACTAGATCGGTTTTATCTTGATGCTTTAGGTGAGGATATAGAGCAACACTCTTCCAGCTTGAAAAGGTTAGAATGTGACAATGTTAGCTGTTCTTTCACCAAAGAAATTGTGTCTGTTCATGATGATGTGGAAGAATCAGTGAAAGTTGAATCTGATGGGGGCAACTCTTCTGAAAGGGATAAAATTATCCCTGAAGATTGCAATTCATCAGATGATGAAAGCTTTCATTCCTTTGTTGATTCACAATCAAATGCTAGACTTTCCAATGCTTCAGCTTGTAGCTTGAGTGACACACACTCTGTGTCATCCCCTCAAAATTCAAGTTCATTACCAAACCAATTTACTAGTTCTCCCCAAAATTCAATCTCAAAAACACAATCTCACCAAGCACCTTATAGTCCAAAACATGAAGAGCAAGAGATTGAGGCTTTTTCCATTTCCCCTCCACCTGCTCCACCAACTCCTCCACCAACTCCTCCACCACCTCCCCCACCACCTCCACCCTTGCAAATGCCACTGTTTTCTCTGCATTCTCTTACCACTTCATCTAGAGTTTCCTCTCACTCTCTACTTTCTTTGACATCTCACAATTTGTCATCTCCTATAAATTCAGATACTTCCTCAAGATCAAATCCAAGTCCTGAAAAGGAGTTGCTTTCTCCACCTCATCCTGACCCTACAAAATCTCCTTCCACCATTCCTCCACCACCATGCCCACCTCCATTTTTAAAAAGTATAAGTAAAAATGCCAAAACCCCACCTCCTCCACCATCTCAATTCCCTCAATTCACACCATTAGGTAAAGATGGAACTCCACTGCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCTGCACCAAATCGCACTATGGTCTGGGATAAGCTAAGATCAAGCTCATTTGAGTTGGATGAGGAAATGATCGAGTCACTTTTCGGCTACAATTTACACGGTTCGATTAAGGATGACGAATCAAAGAGCAAAACCCCATCTCCTAGCAAGCATGTTCTTGAGCCTAAACGGCTGCAGAACATAACAATACTCTCAAAAGCTCTGAATGCGACAGCTGAACAAGTTTGTGAAGCACTAATGCAAGGGAAAGGACTGTCTTTGCAACAACTAGAAGCACTGGTGAAAATGGTGCCCACCAAGGAAGAAGAGGACAAGCTCACCAGTTACAAAGGCGACATAAATGAACTGGGGTCAGCTGAAAAGTTTTTGAGGGCAATGCTGAGTGTCACATCTGCCTTTCAACGAGTAGAAGCCATGCTCTATAGAGAAACTTTTGATGATGAAGTTGTTCATCTCAGGAACTCATTTTCAATGCTCGAGGAGGCATGCAAAGAGCTAAGATCAAGCAGGCTCTTCTCGAAACTGCTTGAAGCGGTACTGAAAACCGGCAACCGCATGAATGTAGGAACAATCAGGGGTGGCGCAAGTGCATTCAAGCTCGATGCGCTTCTCAAGCTTGCAGATGTGAAGGGAACTGACGGCAAAACCACATTGCTCCATTTCGTTGTTCAGGAGATTGTTCGCTCTGAAGGGATCAGAGTTTCAGGCAGCATCATGGGGAAGATTAGCCAGAGAACCACCAAGAACAGAACGGAGGAAGAGAAGGAAGATGATTACAGAAGAATGGGACTAGAACTTGTTTCTGGTCTCAGCACTGAGCTCTACAATGTGAAAAAGACAGCAACCATTGATTTGGATGTTCTTGCAAGCTCTGTGTCGAATCTCTCAGAGGGAGTGGCGAGGATGCAAAATCTGGTGGACATGGAGTTGCGTGAGGATGAAGGAAGCATGAACTTTGTGCGGTCTATGAAGATGTTTTTGAACTATGCAGATGTGAATTTGAAGGAGTTGCGAGGTGATGAAGATAGAGTTCTTGCTCGTGTGAAGGAAATCACAGAGTATTTTCATGGGGTTGTGATGAGCAAAGAGGATGCAAACCTGCTAAGGATCTTTGTCATAGTGAGAGATTTTCTGGGGATGTTGGATAATGTGTGTAAAGAGCTTAGAAGATCTAGAACTCCACGCACTCCAAATCCTCTTGCTCCCTTCAGATAA 2733 0.4314 MTFSWKKKMGRSFCGFELLTMILIIITTLLVLLSSQRTHILSVDDLMNAVGSFNFHGLQQPQMYEENEQGRENKVKKISGLDENEEKQAFIVEKVRSLLGLRSFHARKPSNGDSQFLPPSPSPSPAPAPSPVLHLHPHSHHKQHHFHRNLPPKKTHGGDRDRAKRILVAVLVSVGVAALVGAFVSIFFCWKFTNHRKKPKRTMPLCSSKNKEAKVSSSNSGLDRFYLDALGEDIEQHSSSLKRLECDNVSCSFTKEIVSVHDDVEESVKVESDGGNSSERDKIIPEDCNSSDDESFHSFVDSQSNARLSNASACSLSDTHSVSSPQNSSSLPNQFTSSPQNSISKTQSHQAPYSPKHEEQEIEAFSISPPPAPPTPPPTPPPPPPPPPPLQMPLFSLHSLTTSSRVSSHSLLSLTSHNLSSPINSDTSSRSNPSPEKELLSPPHPDPTKSPSTIPPPPCPPPFLKSISKNAKTPPPPPSQFPQFTPLGKDGTPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLHGSIKDDESKSKTPSPSKHVLEPKRLQNITILSKALNATAEQVCEALMQGKGLSLQQLEALVKMVPTKEEEDKLTSYKGDINELGSAEKFLRAMLSVTSAFQRVEAMLYRETFDDEVVHLRNSFSMLEEACKELRSSRLFSKLLEAVLKTGNRMNVGTIRGGASAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSGSIMGKISQRTTKNRTEEEKEDDYRRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLSEGVARMQNLVDMELREDEGSMNFVRSMKMFLNYADVNLKELRGDEDRVLARVKEITEYFHGVVMSKEDANLLRIFVIVRDFLGMLDNVCKELRRSRTPRTPNPLAPFR* 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1435 910 MobiDBLite consensus disorder prediction 316 351 - -
Lja5g1435 910 MobiDBLite consensus disorder prediction 438 464 - -
Lja5g1435 910 PANTHER FORMIN-LIKE PROTEIN 381 910 - -
Lja5g1435 910 MobiDBLite consensus disorder prediction 316 403 - -
Lja5g1435 910 MobiDBLite consensus disorder prediction 116 132 - -
Lja5g1435 910 Gene3D Formin, FH2 domain 509 902 IPR042201 -
Lja5g1435 910 SMART it6_source 487 902 IPR015425 -
Lja5g1435 910 Coils Coil 227 247 - -
Lja5g1435 910 MobiDBLite consensus disorder prediction 416 498 - -
Lja5g1435 910 Pfam Formin Homology 2 Domain 489 887 IPR015425 -
Lja5g1435 910 MobiDBLite consensus disorder prediction 135 151 - -
Lja5g1435 910 MobiDBLite consensus disorder prediction 416 436 - -
Lja5g1435 910 PANTHER FORMIN-LIKE PROTEIN 63 239 - -
Lja5g1435 910 MobiDBLite consensus disorder prediction 265 297 - -
Lja5g1435 910 ProSiteProfiles Formin homology-2 (FH2) domain profile. 487 910 IPR015425 -
Lja5g1435 910 SUPERFAMILY Formin homology 2 domain (FH2 domain) 500 897 - -
Lja5g1435 910 MobiDBLite consensus disorder prediction 109 159 - -
Lja5g1435 910 PANTHER FORMIN-RELATED 381 910 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lja5g1435 910 MobiDBLite consensus disorder prediction 367 393 - -
Lja5g1435 910 MobiDBLite consensus disorder prediction 265 294 - -
Lja5g1435 910 PANTHER FORMIN-RELATED 63 239 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1435 Lja-Chr5 14477236 14481435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1435 472 910 FH2 protein (formin) Gene Family AT3G05470 74.830 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1435 - - gmx:100793761 1088.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1435 5 14477236 14481435 Lja5g1435 5 14477236 14481435 ECH