Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1420 ATGGGTTTCGATACTCTCCTCTCACAGCCAATGGAGCCATTCACAATCTATGCCACACTGTTCTTTCTCTTTTGCCTTCTTTTCTGGTTACTGAAGAGAAGCCATGCTGACGTATCCACAAAGGCACCCCCGCCACCGGAAGCTGGGGGTGCATGGCCTTTGATCGGTCACCTCCACCTTTTAGGTGGGTCTCACGCAGCTCATGTCATCTTGGGTAACATGGCCGACAAATACGGACCGATCTTCACCTTGCGTTTAGGTGTTCATCGAACTTTGGTCGTGAGCAATCGGGAAATGGCAAAAGAGTGTTTTACGGTAAACGACAAAGTGTTTGCTTCCCGTCCCAACTCTTTAGCCTTTGAAGTTTTGGGCGTCAACAGCTCATTGTTTGGTGCCAGCCCCTATGGCCCCTATTGGCGCTACATGCGCAAGATAGCCACACTGGAGGTCCTGTCCACCAAACGCATAGAAATGCTCAAGCAAGTGATGTACTCGGAGGTGATGGCAGCGGTGAAAAAGAGCTATGATTATTGGGTAATGATGAGGGAAAGTGGTGCTACAAAAGTAGTTACTGAAATGGAAAAATGGTTTGCAGACATAACACTAAACGTTATGTTCAGAACGGTGTTAGGAAAACGGTTAACTGGGATGGGTTGTGAAGATGACAAGGAAGAGAACGAAAAAATTCGAAAAGCAGTTAGGGATTTCTTCCATCTCTTTGGGCAGTTTACTGTTTCTGATGCGGTGCCGTTTTTGAGATGGTTGGATTTGGATGGATATGAGAAGAAAATGAAGAAGACAGCAAAAGAAATGGATGACTTCGCTCAGGCTTGGCTTGAGCAACACAAACGCAACAGTGGTTTAGGAGAATGGAAAAAGGGTGAACATGACTTCATGGACTTGCTTCTTGCCACCGTTGATGATGAGTGTGTACATGGTCATGATGCTGATACCATAATCAAATCCACATGCCTGCAGTTAATTTTAGCTGGCACAGACACTATGACGGGAACATTGACTTGGGCTCTTTCCTTACTTCTCAACAACCGTGAAGTCCTAAATAAGGCTACACATGAGTTAGACACACAAATTGGTAGGGAAATTGCGATAGGAGAATCAGACTTTGAGAAGTTGGAGTATCTACAAGCCATCGTCAAGGAAACATTACGCTTATACCCAACTGTACCACTTAGTGTGCCTCACGAGTCCATGGAAGATTGTATTGTGGGTGGATACCATGTGCCTGCTCACACGCGTCTCTTGACTAATATTTCAAAACTTCAACAAGATCCCTCACTATATTCTGATCCATTGGAGTTTCGCCCAGAGAGATTCCTCACAACCCATAAGGACATTGATCTTAAGGGAAAACATTTTGAGCTCATCCCATTTAGTGCAGGTAGAAGAATATGTCCTGGAATCTCTTTCGCTCTTCAGCTAATGCAAATGACACTTGCTACTCTATTGCATGAATTTGAAATAGTAACTATTGATGGAGGACATGTGGATATGGTTGAAAAAACCGGGATAACCAACGTTAAAGCCTCTCCACTCCAAGTCATTCTTACACCACGTCAATCTATCCAAGTCTACTATCAAAGTTAA 1605 0.4424 MGFDTLLSQPMEPFTIYATLFFLFCLLFWLLKRSHADVSTKAPPPPEAGGAWPLIGHLHLLGGSHAAHVILGNMADKYGPIFTLRLGVHRTLVVSNREMAKECFTVNDKVFASRPNSLAFEVLGVNSSLFGASPYGPYWRYMRKIATLEVLSTKRIEMLKQVMYSEVMAAVKKSYDYWVMMRESGATKVVTEMEKWFADITLNVMFRTVLGKRLTGMGCEDDKEENEKIRKAVRDFFHLFGQFTVSDAVPFLRWLDLDGYEKKMKKTAKEMDDFAQAWLEQHKRNSGLGEWKKGEHDFMDLLLATVDDECVHGHDADTIIKSTCLQLILAGTDTMTGTLTWALSLLLNNREVLNKATHELDTQIGREIAIGESDFEKLEYLQAIVKETLRLYPTVPLSVPHESMEDCIVGGYHVPAHTRLLTNISKLQQDPSLYSDPLEFRPERFLTTHKDIDLKGKHFELIPFSAGRRICPGISFALQLMQMTLATLLHEFEIVTIDGGHVDMVEKTGITNVKASPLQVILTPRQSIQVYYQS* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1420 534 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1420 534 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1420 534 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1420 534 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1420 534 SUPERFAMILY Cytochrome P450 45 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1420 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Lja5g1420 534 PANTHER CYTOCHROME P450 45 531 - -
Lja5g1420 534 Coils Coil 257 277 - -
Lja5g1420 534 Pfam Cytochrome P450 48 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1420 534 Gene3D Cytochrome P450 30 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1420 534 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1420 534 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1420 534 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1420 534 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1420 534 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1420 534 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1420 534 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1420 534 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1420 534 PANTHER CYTOCHROME P450 82C3-RELATED 45 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1420 Lja-Chr5 14293327 14296203 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1420 14 525 Cytochrome P450 AT4G31940 47.885 3.77e-170 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1420 - - gmx:100778017 668.692