Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1408 ATGTCGACTGAGCCGCTAATTCAACCGCCGGATGCGGTGGCGGCGTCCCGCCAATGCGGCGAACTGTGGCGGATTTTCGACGAGTTGCCCAAAGCCACCATCGTGTCAGTTTCTCGACCAGAGACTGGAGAAATTAGCCCAATTCTCCTTTCTTATACCATTGAATTGCAGTACAAACAGTTCAAGTGGCGGCTACGGAAGAAAGCATCACAAGTTCTTTATCTGCAGTTCGCTTTGCGGAAACGTGCCTTGATTGAAGATCTTCATGGCAAGCAAGGGCAGGTAAAAGAATGGCTTCAAAGCATAGGAATAGTTGATCAAACTGTGATGGTGCAAGATGATGAGGAACCTGATGATGGAGCTGTACCTTTACATCATAAAGACAGTGTTAACAGCAGATATGTCCCATCTGTTGCTGCTCTGTCAATAATTCGTCCATCATTAGGAGGTCAGCAGTCAATTGCTGAGAAAGCCAAAGTAGCAATGCAGAGTTATTTGGATCTGTTTTTGGGAAACATGGATATTGTGAATTCTCAAGAGGTCTGCAAGTTTTTGGAGGTCTCCAAGCTATCCTTTTTACAGGAGTATGGTCCAAAACTGAGAGAGGGATATGTAATGGTGAATCATTTGTCAAATATTTCGCAGGATTCAGATGTATCATGCTTTCCATGTAATTGGTTTCGTTGTTGTGATAACAACTGGAAGAAGGTATGGGCTGTATTGAAACCTGGGTTTTTGGCCTTGCTGGATGACCCCTTCAACAACAAACTACTGGATATAATCATGTTTGATGTCCTCCCATCCTCAACTGGAAATGGAGGGACCAAAATATATTTAGCTGAAACTAAAAAGGAACACAATCCTCTGCGTTACACATTTGAGGTTACTAGTGGAAATAAGAGCATATGTTTGAGAACAACAAGCAGTGATAAAGTTAAAGCTTGGGTTACTGCAATAAATGAAGCTGGTCTAAGACCTCTGGAGGGTTGGTGTTATCCTCATCGCTTTGGTTCATTTTCTCCTGTAAGAGGTTTGGCTGAAGATGGAAGCCAAGCCCAGTGGTATGTAGATGGACAGGCAGCGTTTGAAGCAATTGCTTCTTCAATTCAAGATGCAAAGTCAGAGATCTTCATTACAGGATGGTGGCTATGTCCAGAGCTATATCTGCGACGGCCTTTTGATAGTTTTTCTACCTTTAGGTTAGACTCATTACTAGAAGAAAAAGCTAAGCAAGGGGTTCAGATTTATGTGCTGCTCTACAAGGAGGTTTCTTTAGCCTTGAAAATCAACAGCTCGTACAGTATGAGAAGACTGCTCAAAATTCATGAGAATGTGAGGGTATTGCGATATCCTGACCATTTCGCTTCTCGTGTGTATTTATGGTCGCATCATGAAAAACTTGTAATAATTGATTACAAAATTTGCTATATTGGAGGGTTAGATTTATGCTTTGGACGATATGACACACCTGAGCATAAAGTAGGTGATTGCCCCTCTGTAATATGGCCTGGAAAGGACTATTACAATCCAAGAGAATCTGAACCAAATTCATGGGAAGACACCATGACAGATGAATTGGATCGCCAGAAATATCCTCGCATGCCATGGCATGATGTCCATTGTGCTATTTGGGGACCTCCATGTCGTGACATTGCTCGGCACTTTATTCAACGGTGGAACCATGCTAAGAGAACTAAGGCTCCAAATGAACATGAAATTCCACTACTTATGCCTCACCATCACATGGTCTTACCACATTACATGGGAAGAAGCAAAGAAATAGACATTGATGGAAAGGAAGATGAAGATAACAGGAAAGAAATTGAAAGGCAGGATTCATTTTCTTCAGAGTCTCCAACACAAGATATACCCCTCCTTTTACCTCAAGAAGCGGACGGATTAGTTACTTCAAGTGGAGACCAAACAAATTTCAGTGAACATTCTCCATTATCATCCCAAAATGTGGAGCATGAATCTTTAGTTCCAGATAACCAGAAGAAAGGGTTTCAAGATGAAGTTGTTACTTTAAACTTGGGGGCACAATCTCTAGTTGATACTCTAGATGATTGGTGGGATACACCTGAAGGTACCAATGATGCTTCTACTTTGGAATATGGAGAAGTTGGTCCCCGTACTACTTGTCACTGTCAGGTGATCAGAAGTGTCAGCCAGTGGTCTGCTGGAACAAGTCAGACTGAAGAAAGTATTCACACCGCATATTGTTCTCTCATTGATAAAGCAAAACATTTTATCTACATTGAGAATCAATTTTTCATATCAGGTCTAGCAAAGGATGACACAATACAAAATCTTATTTTGGAAGCACTATATAGGCGTATTTTGCAAGCCCACAAAGAGGAAAAAGAATTTAGAGTTATAGTTGTGATGCCCCTCTTGCCTGGATTCCAGGGCGGTCTAGATGATGGTGGTGCCGCAACTGTGAGGGCCTTAACACATTGGCAATATAGAACAATTTCTAGAGGAAAGCACTCCATATTGCACAATCTTGAAGCTATACTTGGTCCTAAAGCACATGATTATATTTCTTTCTATGGACTAAGAACCCATGGTCGACTTTATGCGGATGGTCCTATGGCTACAAGTCAGGTATATGTGCACAGCAAATTGATGATAATTGATGATCGTGTAGCTTTTATTGGATCATCTAATATAAATGACCGGAGTTTGCTTGGATTAAGAGACTCTGAGATCGGAGTGCTTATAGAAGACAAAGAATATGTTGGATCATTGATGAACGGAAAGCCTTGGAAGGCTGGAAAATTTTCCCATAGCCTCCGCTGCTCGCTATGGTCTGAGCATCTTGGTCTTTCTTCTGGAGATATCAGTAAAATCAGTGATCCAGTGGCAGATTCAACCTACAAGGACTTGTGGTCAGCAACTGCAAAGGAAAATACTAGGATATACCATGAGGTCTTCGCTTGCATTCCCAATGACTTGATACACTCGAGAGCTGCACTTCGGCAAAGCATGGTTTACTGGAAGGAAAAACTTGGTCATACCACCATAGACTTGGGAATAGCCCCTGATAAGTTAGTCTGTCGTGAAAATGGAGAAACCAAAGCAATAGACCCGGTAGATAGATTGAAGCATGTAAAAGGACACCTTGTTTCTTTCCCTTTGGAGTTCATGCGTGATGAAGATCTCAGACCAGCTGTTATCGAGAGTGAGTTTTATGTATCTCCTCAAGTATATCATTAG 3219 0.4172 MSTEPLIQPPDAVAASRQCGELWRIFDELPKATIVSVSRPETGEISPILLSYTIELQYKQFKWRLRKKASQVLYLQFALRKRALIEDLHGKQGQVKEWLQSIGIVDQTVMVQDDEEPDDGAVPLHHKDSVNSRYVPSVAALSIIRPSLGGQQSIAEKAKVAMQSYLDLFLGNMDIVNSQEVCKFLEVSKLSFLQEYGPKLREGYVMVNHLSNISQDSDVSCFPCNWFRCCDNNWKKVWAVLKPGFLALLDDPFNNKLLDIIMFDVLPSSTGNGGTKIYLAETKKEHNPLRYTFEVTSGNKSICLRTTSSDKVKAWVTAINEAGLRPLEGWCYPHRFGSFSPVRGLAEDGSQAQWYVDGQAAFEAIASSIQDAKSEIFITGWWLCPELYLRRPFDSFSTFRLDSLLEEKAKQGVQIYVLLYKEVSLALKINSSYSMRRLLKIHENVRVLRYPDHFASRVYLWSHHEKLVIIDYKICYIGGLDLCFGRYDTPEHKVGDCPSVIWPGKDYYNPRESEPNSWEDTMTDELDRQKYPRMPWHDVHCAIWGPPCRDIARHFIQRWNHAKRTKAPNEHEIPLLMPHHHMVLPHYMGRSKEIDIDGKEDEDNRKEIERQDSFSSESPTQDIPLLLPQEADGLVTSSGDQTNFSEHSPLSSQNVEHESLVPDNQKKGFQDEVVTLNLGAQSLVDTLDDWWDTPEGTNDASTLEYGEVGPRTTCHCQVIRSVSQWSAGTSQTEESIHTAYCSLIDKAKHFIYIENQFFISGLAKDDTIQNLILEALYRRILQAHKEEKEFRVIVVMPLLPGFQGGLDDGGAATVRALTHWQYRTISRGKHSILHNLEAILGPKAHDYISFYGLRTHGRLYADGPMATSQVYVHSKLMIIDDRVAFIGSSNINDRSLLGLRDSEIGVLIEDKEYVGSLMNGKPWKAGKFSHSLRCSLWSEHLGLSSGDISKISDPVADSTYKDLWSATAKENTRIYHEVFACIPNDLIHSRAALRQSMVYWKEKLGHTTIDLGIAPDKLVCRENGETKAIDPVDRLKHVKGHLVSFPLEFMRDEDLRPAVIESEFYVSPQVYH* 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1408 1072 PIRSF PLD_euk 581 1072 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lja5g1408 1072 PIRSF PLD_euk 29 594 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lja5g1408 1072 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 459 486 IPR001736 GO:0003824
Lja5g1408 1072 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 868 895 IPR001736 GO:0003824
Lja5g1408 1072 PANTHER PHOSPHOLIPASE D 17 1069 IPR015679 -
Lja5g1408 1072 Pfam Phospholipase D Active site motif 459 486 IPR001736 GO:0003824
Lja5g1408 1072 ProSiteProfiles PH domain profile. 198 324 IPR001849 -
Lja5g1408 1072 MobiDBLite consensus disorder prediction 634 659 - -
Lja5g1408 1072 SUPERFAMILY Phospholipase D/nuclease 707 918 - -
Lja5g1408 1072 SMART pld_4 868 895 IPR001736 GO:0003824
Lja5g1408 1072 SMART pld_4 459 486 IPR001736 GO:0003824
Lja5g1408 1072 MobiDBLite consensus disorder prediction 598 660 - -
Lja5g1408 1072 Gene3D Endonuclease Chain A 345 582 - -
Lja5g1408 1072 MobiDBLite consensus disorder prediction 598 613 - -
Lja5g1408 1072 CDD PLDc_vPLD1_2_yPLD_like_1 352 497 - -
Lja5g1408 1072 Gene3D - 209 324 IPR011993 -
Lja5g1408 1072 SUPERFAMILY Phospholipase D/nuclease 315 579 - -
Lja5g1408 1072 SMART PH_update 199 326 IPR001849 -
Lja5g1408 1072 SUPERFAMILY PH domain-like 231 322 - -
Lja5g1408 1072 CDD PLDc_vPLD1_2_yPLD_like_2 728 912 - -
Lja5g1408 1072 CDD PH_PLD 176 322 - -
Lja5g1408 1072 Gene3D Endonuclease Chain A 685 931 - -
Lja5g1408 1072 Pfam PLD-like domain 741 914 IPR025202 -
Lja5g1408 1072 PANTHER PHOSPHOLIPASE D ZETA 2 17 1069 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1408 Lja-Chr5 14089007 14100769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1408 24 1072 Phospholipase D Gene Family (Wang group) AT3G05630 64.873 0.0 1392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1408 K01115 - gmx:100796914 1910.96