Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1363 ATGGAAACCATGTCCGGCGACAAAACCATCGCGACGGAGCAATACGGTGTCCTCCTGTATTACAAGTACGCCGAGATCCCCAACCTGAACGACGTCGTCACATTCTACCGCTCCAACTGCTCCTCCCTCGGCCTCCTCGGCCGCGTTCGCATTTCTCCCCACGGCGTCAATGTCACCGTTGGTGGCAACTTACACTCTTTGGAGAAACACATTGAAGCCCTCAAGTCCAACCATGACTTATTTGAAGGAACTGATTTCAAGCTTGCAACCTGTCATCACCCTTCAAATGACAAGGTTGCTGAGGAATCTGGTTTCACTTCACTCTCCATTCGGATCGTCAAGGAACTGGTTACTCTTAGTTCTCATCCACTTTTGAAGTCGCCGGAAATATCAAATGCTGGAAAACATCTATCTGCCACTGAGTTCCATTCTTCACTTCACAATGCTAACAGTGAGAGTCCGGAAAAGAGCCTTGTTTTACTTGATGCGAGGAATCTGTATGAAACAAGAATTGGGAAATTTCAGGCACCGAATGTTGATACTTTGGACCCGCAAGTTAGGCAGTATAGTGATATGTCGTCATGGATAGATGCTAATGGTGAGCAGTTGAAAGGCAAAAATATCCTCATGTATTGTACCGGTGGAATTAGGTGTGAAATGGCATCGGCATATATTAAGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGCTATTTGGTGGTATACAACGGTATATGGAGCAATTCCCAGATGGTGGTTTCTTCAAAGGAAAGAATTTTGTTTTTGATCATCGGATATCAGTTGGAAGTTCAGATGCTAATATTATTGGTACCTGCCTTATTTGTCACTGCTCATTTGATGATTACTCTTCACGCTGCCGATGTACGCATTGCAGAATGCTTGTCTTGGTTTGTCATGGTTGCCAGAATGAATCTGCACTGTATGTTTGTGAGCTATGCCAAAGACAGGGAAAGACTGTCAGGTCAAAGCAGTTAATTGAAAATGGTGAACCAGAACCATCATTACCAGATCTTGAGATACATAATTTTTCTTCAGACACTATAGTCTTACCTCAAGTGCCTAGAGAAGATGATGTAAGGACCTCAAGAAAACTGAGAATCTTATGCTTGCACGGGTTTCGGCAGAATGCATCCAGTTTTAAAGGAAGAACAGCATCACTAGCCAAAAAACTAAAAAAAATGTCTGAATTTATTTTTATAGATGCCCCTCATGAATTGTCATTCATATATCAGACCCCCATGCCAGTGCCCGACATGAATTGTGCATCGCCATCGTTACCTCCTAGTCCCCCACCTTCGCAGAGTTGCAACAAGAAGTTTGCATGGTTTGTGGCACAAAATTTTGACAGAAGCAGCGGTGTTGATTGGAAGGTAGCAGATGGCCCATTTGATCCGCTTCAGTACCAGCAGCAAACTGCTGGATATGATATTTCACTATCACACTTGAAGAAAGTGTTCTCCCAAGAAGGGCCATTTGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGGCTGCCTTAGTCTCCGCACAACAGGAAAAGCTAAGAGGTGAAATGGATTTCAAATTCGTAGTCTTGTGCTCAGGCTTTGCTCTACAAGTGAAGGAGATGGAGTTTGGTCCTATAAAGTGCCCTTGTCTTCATATTTTCGGCAATGAACAAGGTAAAGACAGACAGATAGCCAACCAAGCTAGCAAGGAACTTGCTTCTCTATATGATGATAGTTGTTCTGTAATAGTTGAACATTATTGTGGTCATATAATTCCTACTCGATCTCCTTATATTGATGAGATCAAGGATTTCCTAGGCCGTTTTCTGTAA 1842 0.4311 METMSGDKTIATEQYGVLLYYKYAEIPNLNDVVTFYRSNCSSLGLLGRVRISPHGVNVTVGGNLHSLEKHIEALKSNHDLFEGTDFKLATCHHPSNDKVAEESGFTSLSIRIVKELVTLSSHPLLKSPEISNAGKHLSATEFHSSLHNANSESPEKSLVLLDARNLYETRIGKFQAPNVDTLDPQVRQYSDMSSWIDANGEQLKGKNILMYCTGGIRCEMASAYIKSKGAGFENVFQLFGGIQRYMEQFPDGGFFKGKNFVFDHRISVGSSDANIIGTCLICHCSFDDYSSRCRCTHCRMLVLVCHGCQNESALYVCELCQRQGKTVRSKQLIENGEPEPSLPDLEIHNFSSDTIVLPQVPREDDVRTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKMSEFIFIDAPHELSFIYQTPMPVPDMNCASPSLPPSPPPSQSCNKKFAWFVAQNFDRSSGVDWKVADGPFDPLQYQQQTAGYDISLSHLKKVFSQEGPFDGILGFSQGAAMAALVSAQQEKLRGEMDFKFVVLCSGFALQVKEMEFGPIKCPCLHIFGNEQGKDRQIANQASKELASLYDDSCSVIVEHYCGHIIPTRSPYIDEIKDFLGRFL* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1363 613 ProSiteProfiles Rhodanese domain profile. 154 254 IPR001763 -
Lja5g1363 613 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 12 612 - -
Lja5g1363 613 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 122 268 IPR036873 -
Lja5g1363 613 SMART rhod_4 144 251 IPR001763 -
Lja5g1363 613 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 12 612 IPR020936 -
Lja5g1363 613 SUPERFAMILY alpha/beta-Hydrolases 368 613 IPR029058 -
Lja5g1363 613 Pfam Serine hydrolase (FSH1) 370 604 IPR005645 -
Lja5g1363 613 Gene3D alpha/beta hydrolase 368 613 IPR029058 -
Lja5g1363 613 CDD RHOD_YceA 134 247 - -
Lja5g1363 613 Pfam UPF0176 acylphosphatase like domain 16 115 IPR040503 -
Lja5g1363 613 Gene3D - 4 117 - -
Lja5g1363 613 Pfam Rhodanase C-terminal 256 321 IPR022111 -
Lja5g1363 613 Gene3D - 126 280 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1363 Lja-Chr5 13658366 13669065 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1363 13 613 Sulfurtransferasese or Rhodanese AT1G09280 65.124 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1363 - - gmx:100786152 1022.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1363 5 13658366 13669065 Lja5g1363 5 13658366 13669065 ECH