Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1329 ATGGCCATGAGGAACATTTTCTGGGTTGGCATTGTAATAGGACTTGTTTTTAGCAACTGGGTTGATGGCCTTGCAACCTATGATCAATATCATTACATGAATGAAACAGAGCTGTCTTTGTTGGAGGCTAATGAAGCTTCTTCCCCATCCTTAGTTGGGAGGAGACCTTTAATGATAGGACTCACTCTTATTCAAAATGCATGGACTAAAAGAGCAGTCTGCATGGATGAAACATTGCCTGGATATCACCTTGATCGAGGATATGGATCAGGAGCAAACAGCTGGCTTGTTAATTTAGAGGGAGGTGGGTGGTGTAATAATATCAAAACATGTGTTTATCGCAAGACATCACGGCGTGGATCATCGACATTCATGGAAAAGGAGATACCATTCACAGGAATATTAAGCAATGATGCAAAAGAGAATCCAGATTTTTTCAACTGGAACAGGGTAAAAATCCGTTATTGTGATGGTGCTTCTTTCACCGGGGATGCTGAAGATAAGGTTTCAGGACTTCAATTTAGAGGACAGCGTATTTGGTGGGCGGCAATGGATGAATTGATGTCAAAGGGAATGCGTTTTGCTAAGCAGGCTCTTCTTTCTGGATGCTCAGCGGGTGGTCTAGCTACTATTATACACTGCGATGAATTTCGAGGCCTATTTCCATGGACTACCAAAGTGAAGTGTCTCAGCGATGCAGGGTTGTTTCTTGATGCCCTTGATGTATCTGGCGGGCGCACCCTCAGGAACTTTTTCCATGGTGTTGTAAGGCTACAGGGAGTGCAGAACAATCTGCCGCGCACTTGTACTAATCGCCTTAATCCTACTTTGTGCTTCTTCCCTCAGAACTTGATTGCCAATATTAAAACCCCGCTGTTCATTCTTAATAGTGCCTATGATTCATGGCAGATCATGTCAAGTTTAGCAGCTCCATCAGCAGATCCACATGGCTATTGGCGTGATTGTAGATTAAACTATGCTAAATGTTCTAGTTCACAAATACAATTTCTGCAAGGATTCAGGAACCAAATGCTGAATGTTGTTAGCGGTTTCTCAAGATCAAATCAAAATGGAGTGTTCATAAATTCATGTTTTTCTCACTGCCAATCTGAGAGGCCTGATACATGGTTTTCTTACAATTCTCCTGTCATAGCAAATAAGAAAATTGCTCTGGCTGTTGGAGACTGGTATTTTGACCGAGCTGCGGTTAAGTCCACAGATTGTCCTTACCCTTGTGATAATACATGTCGCAATTTGGTCTTCAGATGA 1269 0.4232 MAMRNIFWVGIVIGLVFSNWVDGLATYDQYHYMNETELSLLEANEASSPSLVGRRPLMIGLTLIQNAWTKRAVCMDETLPGYHLDRGYGSGANSWLVNLEGGGWCNNIKTCVYRKTSRRGSSTFMEKEIPFTGILSNDAKENPDFFNWNRVKIRYCDGASFTGDAEDKVSGLQFRGQRIWWAAMDELMSKGMRFAKQALLSGCSAGGLATIIHCDEFRGLFPWTTKVKCLSDAGLFLDALDVSGGRTLRNFFHGVVRLQGVQNNLPRTCTNRLNPTLCFFPQNLIANIKTPLFILNSAYDSWQIMSSLAAPSADPHGYWRDCRLNYAKCSSSQIQFLQGFRNQMLNVVSGFSRSNQNGVFINSCFSHCQSERPDTWFSYNSPVIANKKIALAVGDWYFDRAAVKSTDCPYPCDNTCRNLVFR* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1329 422 Pfam Pectinacetylesterase 57 401 IPR004963 GO:0016787
Lja5g1329 422 PANTHER NOTUM-RELATED 5 421 IPR004963 GO:0016787
Lja5g1329 422 PANTHER PECTIN ACETYLESTERASE 5 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1329 Lja-Chr5 13318857 13322380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1329 58 422 Carbohydrate Esterase AT1G57590 72.055 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1329 K19882 - gmx:100810716 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0504 1 4522321 4527223 Lja5g1329 5 13318857 13322380 ECH
Lja5g1329 5 13318857 13322380 Lja1g0504 1 4522321 4527223 ECH
Lja5g1329 5 13318857 13322380 Lja5g1329 5 13318857 13322380 ECH
Lja4g1447 4 13266473 13272150 Lja5g1329 5 13318857 13322380 ECH
Lja1g0504 1 4522321 4527223 Lja5g1329 5 13318857 13322380 PCT