Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1319 ATGGCGGAACATCTTCCAATCTACCTCTACATCGTCGCGTTCCTCTGCACAATTGGAGCTGTTTCTTTGGCTCTGCTGCACATTTATAAGCACCTTGTCAATTACACCGAACCCACTTACCAGCGCTACATTGTTCGGATTGTTTTCATGGTTCCGGTTTATGCGTTAATGTCATTCTTGTCCCTTGTTCTACCTGCGAGTTCAATCTATTTTAATTCCATCCGAGAAGTTTATGAAGCTTGGGTCATTTATAATTTCCTATCACTGTGTCTTGCATGGGTTGGTGGTCCTGGAGCAGTGGTCCTCAGTTTAAGTGGTCGGGTTCTGAAGCCGTCGTGGTTTCTCATGACTTGTTGCCTTTCCCCTATACCGCTAGACGGGCGTTTTATACGAAAATGCAAGCAAGGTGGTTTGCAGTTTGTGATTTTGAAGCCCATTTTAGTTGCTGTTACACTTATACTTTATGTCAAGGGGAAATATAAGGATGGCAATTTCAGTCCAAAGCAGTCGTACTTGTATCTTACAATCATATACACATTCTCATACACAATGGCGCTCTATGCTCTTGCTCTATTTTATGTGGCATGCAAGGATCTGCTTCATCCATTCAATCCAGTACCAAAGTTTATCATTATAAAATCTGTTGTATTCCTGACTTATTGGCAGGGTGTCTTAGTCTTCCTTGCTGCAAAGTCAAAATTCATTAAGGATGCAGATGAAGCTGCTATACTTCAAGATTTTATCATTTGTGTTGAAATGCTTGTTGCGGCTGTGGGCCACTTTTATGCATTTCCATACAAAGAATACGCTGGTGCTAACATAGGTGGTGTATCTCGTGGCTTCACAGCTAGCCTTGGTCATGCTTTGATGTTAAATGACTTCTACCATGACACAGTCCACCAGTTTGCACCAACATATCATGATTACGTTCTCTATAACCACGGTGAAGGTGAAGAAGGAACAAGGAAGTATAGGTCACGAACTTTTGTTCCGCTTGGCCCCGAGATGGATGCAGTGAGAAGAAATAAGCATATGTTTGAAAACAAGGTGGATGACATACAGCTCTCACGTTTCTCTTCTTCTAATAGCAGCACTCCCTCAAATTCAGGTCCCATCTCTGATGTCTCACATTCTGATGCAATGAAATCTTCCCTACTTGTGGATGTGTCAAATTCTGTATCTGTGCCGTACGATCTTACACTTATAGATTTAGATTTATCTGATCACCCTGAGAAGGTTCCAGCGGTTGATAAAGCTGGCACTAGGTGA 1269 0.4216 MAEHLPIYLYIVAFLCTIGAVSLALLHIYKHLVNYTEPTYQRYIVRIVFMVPVYALMSFLSLVLPASSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSWFLMTCCLSPIPLDGRFIRKCKQGGLQFVILKPILVAVTLILYVKGKYKDGNFSPKQSYLYLTIIYTFSYTMALYALALFYVACKDLLHPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSKFIKDADEAAILQDFIICVEMLVAAVGHFYAFPYKEYAGANIGGVSRGFTASLGHALMLNDFYHDTVHQFAPTYHDYVLYNHGEGEEGTRKYRSRTFVPLGPEMDAVRRNKHMFENKVDDIQLSRFSSSNSSTPSNSGPISDVSHSDAMKSSLLVDVSNSVSVPYDLTLIDLDLSDHPEKVPAVDKAGTR* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1319 422 PANTHER BNAA05G31380D PROTEIN 6 418 - -
Lja5g1319 422 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 6 418 IPR005178 -
Lja5g1319 422 MobiDBLite consensus disorder prediction 357 376 - -
Lja5g1319 422 Pfam Organic solute transporter Ostalpha 10 269 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1319 Lja-Chr5 13234172 13239197 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1319 - - gmx:100789701 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0496 1 4464027 4470291 Lja5g1319 5 13234172 13239197 PCT
Lja5g1319 5 13234172 13239197 Lja1g0784 1 7584357 7592826 PCT