Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1306 ATGATGACAATGAAGCTGTTTTTGATTGCATTTGTTTTTACATGCTTAGTTTCTGGGATTGTCTCCTCAAGATCTGTGCTTTCTGACTTAGAAAACGATGCTGTCTCAGCAAAGCCTTTCTCCTCACCACAACCTATTATGGTTAACCTCACTCTTATTCAAGGAGCTGATTCTAAAGGAGCTGTTTGTTTAGATGGAACATTGCCTGGTTACCATTTGGACAGTGGATTTGGATCTGGTGCAAATAGCTGGCTTATTCATTTGGAGGGAGGAGGATGGTGTGACACCGTTAGAAACTGTGTTTATAGAAAAAGGACTCGTCGAGGTTCCTCTAAATACATGGAAAATCAAATACAATTCACAGGAATATTGAGCAATAAAGCTGAAGAAAACCCTGATTTCTATAACTGGAACAGAGTTAAATTAAGGTACTGTGATGGAGCATCCTTCAGTGGAGATAGTGAAAATGAGTCAGCAGAACTTCAATTTCGAGGACAAAAAATCTGGCTAGCTGCAGTTGAGGAATTAATGTCCAAAGGAATGCAGGAAGCCAACCAGGCCCTTCTCTCTGGATGCTCAGCGGGTGGTTTGGCATCCATAATTCATTGTGATGAGTTCCAGAGCTTGTTTCCAAATTCTACCAAAGTAAAATGTTTGAGTGATGCAGGGTTTTTTATTGATGCAGCTGATGTATCTGGTGGACGCACGTTGAGGAGTCTGTTTGAAGGAGTAGTTCAGCTACAGTGGGCTGTTTTGAAATTGCAGGAAGTTCAAAAAAATCTGCCTAAGAGTTGTCTCAACCAACAGGACGCAACTTCGTGCTTCTTTCCTCAAAACATTGTCCAACATCTTGAGACACCATTGTTTCTACTCAATGCTGCATATGATGCATGGCAGGTCCTAGCCAGTTTAGCCCCACCATCTGCTGACCCCCTTGGCTTTTGGAGTGACTGCAGATCAAACCATGCAAATTGTAACTCATCTCAAATTCAGTTCCTTCAAGACTTCAGAAATCAAATGCTAGATGACGTGAAAAACTTCTCAAATTCATCTGAAAGTGGACTTTTCATAAATTCTTGTTTTTCTCATTGCCAGTCTGAGAGACAGGAGACATGGTTTGCGGATGACTCTCCCCTTATAGGGGACAAGCCAATTGCTATTGCTGTTGGAGACTGGTATTTCGATCGAGAAGCTGTCAAATCTATTGACTGTGCTTACCCCTGTGGCAACAATTGCCATAATCTGGTCTTTAATTGA 1257 0.4161 MMTMKLFLIAFVFTCLVSGIVSSRSVLSDLENDAVSAKPFSSPQPIMVNLTLIQGADSKGAVCLDGTLPGYHLDSGFGSGANSWLIHLEGGGWCDTVRNCVYRKRTRRGSSKYMENQIQFTGILSNKAEENPDFYNWNRVKLRYCDGASFSGDSENESAELQFRGQKIWLAAVEELMSKGMQEANQALLSGCSAGGLASIIHCDEFQSLFPNSTKVKCLSDAGFFIDAADVSGGRTLRSLFEGVVQLQWAVLKLQEVQKNLPKSCLNQQDATSCFFPQNIVQHLETPLFLLNAAYDAWQVLASLAPPSADPLGFWSDCRSNHANCNSSQIQFLQDFRNQMLDDVKNFSNSSESGLFINSCFSHCQSERQETWFADDSPLIGDKPIAIAVGDWYFDREAVKSIDCAYPCGNNCHNLVFN* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1306 418 Pfam Pectinacetylesterase 43 397 IPR004963 GO:0016787
Lja5g1306 418 PANTHER PECTIN ACETYLESTERASE 3 417 - -
Lja5g1306 418 PANTHER NOTUM-RELATED 3 417 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1306 Lja-Chr5 13125244 13139234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1306 40 417 Carbohydrate Esterase AT1G57590 67.725 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1306 K19882 - gmx:100786972 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0485 1 4367622 4372646 Lja5g1306 5 13125244 13139234 PCT