Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1302 ATGGGATATCTAATCGGTGTTGCCATGGTGATTTTTACTGTTTTGATCATCTCAATGATTTGGAAAAACTTTATGGTTCTGTTTTGGAGGCCTTATGCCTTGACTAGGCACTTCCAAAAGCAAGGAGTCAGGGGGCCACCTTACTCTCTTCTTTTTGGCTCTCTCCATGAAATCAGAACAATGATGAAGGATGCAAGGGAAAAGGTCATGGATAATCACTCACATGATATCACTCAAATGGTTCTTCCTCACTACCAAAAATGGTCCTCCATATATGGGGAGACATTTATGTATTGGTATGGAACACAACCAAGGATTTGCATCCCTGATCCTGACCTGGCCAAGGAGATCTTATCAAACAAGTTTGGTTTCTACTCAAAACTCAATACAAGGCCCTTAATAAAAACCATGATTGGAAACGGGTTAGCTTTGGTCAAGGGATTGGACTGGGTTAGGCACAGAAGAATACTCAATCCAGCATTCTCCATGGACAAACTGAAGGTTATGATCAGTAGGATGGCTGAATGTACCATTTCCATGCTTGATGAGTGGCAAAGTCAAGCCCTTGAAGCCAAGGACCAAATCAAGACAATAGAGGTAAATCAAGAATTTCGAGAGCTAACTGCAAATATAATAGCCCACACTGCCTTTGGTGCAAGCTTTGCCCAAGGAAGGGAAGCCTTTGATGCACAAAGAGAACTTCAAAAGTACTGCATATCATCAAGTCTTGACGTTTCCATTCCTGGCAGCCAATATCTTCCAACTCAGTCAAATTTACAGATATGGAAGCTTGACGGGAAAGTGAAGAAATCACTTGACCGCATTATAGAAAGTAGATTGCACCTTCAATCAAGTAATGGCAAGTCACATTTCTCTTATGGAGATGATCTACTTGGTGTGATGATGGATACAGAAAAATCAAATGCTGGTCCTAAGATGAATATGAACGAGATCATGGAAGAATGCAAGACCTTTTTCTTCACTGGTCATGAAACCACTTCAAACTGGCTCACTTGGGCTGTCTTCTTGTTAAGTTTGCACAAAGATTGGCAAGAAAAACTCAGACAAGAGGTCCTGCAGAATTGTGGCATGGAAATTCCTGATGCAAACATGCTATCAAAGTTAAAAATGGTGAACATGGTATTGCTGGAAGCGTTAAGGTTGTATTGCCCTGTGATGGCACTATACAGAGTGGCTTCAAAAGACATGAAATTGGGGAACTTATTGATCCCAAAAGAAACATGTCTTGTAATGCCAATTGCAATGATTCACAGGAGCAAAGAGTACTGGGGTGAAGATGCAAACGAGTTCAATCCACTGAGATTCATAAATGGAGTTGCTAAGGCTGCAAAGCACCCAAATGCTCTGCTTGCCTTTTCTGTGGGTCCAAGAAATTGCATTGGTCAGAATTTTGCTATGCTTGAAGCAAAGACAGTAATGGCTTTAATTCTTCAACGATTTTCTTGGTCTCTTTCCCCTGATTATGAACATGCACCTGTGAACAACCTCACTATGCAACCACAACATGGTCTTCCTATCATTCTAAAACCTTTGCAAATGTAA 1563 0.4095 MGYLIGVAMVIFTVLIISMIWKNFMVLFWRPYALTRHFQKQGVRGPPYSLLFGSLHEIRTMMKDAREKVMDNHSHDITQMVLPHYQKWSSIYGETFMYWYGTQPRICIPDPDLAKEILSNKFGFYSKLNTRPLIKTMIGNGLALVKGLDWVRHRRILNPAFSMDKLKVMISRMAECTISMLDEWQSQALEAKDQIKTIEVNQEFRELTANIIAHTAFGASFAQGREAFDAQRELQKYCISSSLDVSIPGSQYLPTQSNLQIWKLDGKVKKSLDRIIESRLHLQSSNGKSHFSYGDDLLGVMMDTEKSNAGPKMNMNEIMEECKTFFFTGHETTSNWLTWAVFLLSLHKDWQEKLRQEVLQNCGMEIPDANMLSKLKMVNMVLLEALRLYCPVMALYRVASKDMKLGNLLIPKETCLVMPIAMIHRSKEYWGEDANEFNPLRFINGVAKAAKHPNALLAFSVGPRNCIGQNFAMLEAKTVMALILQRFSWSLSPDYEHAPVNNLTMQPQHGLPIILKPLQM* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1302 520 Pfam Cytochrome P450 81 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1302 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Lja5g1302 520 PANTHER P450, PUTATIVE-RELATED 5 514 - -
Lja5g1302 520 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1302 520 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1302 520 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1302 520 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1302 520 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1302 520 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1302 520 Gene3D Cytochrome P450 28 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1302 520 Coils Coil 181 201 - -
Lja5g1302 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 514 - -
Lja5g1302 520 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1302 520 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1302 520 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1302 520 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g1302 520 SUPERFAMILY Cytochrome P450 42 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1302 Lja-Chr5 13073339 13076930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1302 21 519 Cytochrome P450 AT2G46960 53.755 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1302 K20660 - aprc:113872106 815.839