Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja5g1278 | ATGAATACAAAAATAATTGCCTCTGGTGTATCCCTCATCCTGGTGGTGGGTGTTGCCATTGGCGTTGTGGTAGTTGTTAACAAAAAAGACACAACTGATCCTGTGGTAGCAGCACAACAAAAATCCGTGAAGTCAATGTGTGAGGGAACCGAAGACCCTAAGCTCTGTCACGACACTCTCAGCACCGTGAAACCCACCAACTCCTCTGACCCGAACGCTTATATAGCGGCAGTGGTGGAAGCAACCGCCAAGAGCGTCATCCAAGCCATGAACATGAGCGACAGGCTCACGGTGGATCATGGCGGCAAGGACCCCGGCATGAAAATGGCCCTTGACGACTGCAAGGACTTGATGCAGTTCGCCATAGATAGTCTCGAGTCCGCGACTAATCTAGTCCGTGACAACAACATACAAGCTGTTCATGAACAGACCCCTGACTTCAGGAACTGGTTGAGCGCTGTCATGTCATACCAACAATCTTGCATGGAAGGGTTTGAAGATGGGAAAAGTGGTGAGGAAGCGGTTAAGGGACAATTGCAAGAGGGTAGTTTGGACCAGATGGGGAAGCTCACTGGGATAGCCCTTGACATTGTCTCGGACTTGTCCAGGATTCTTCAGACCTTTGACTTGAAGCTGGACCTAAACCCTGCTTCTCGTCGCCTTCTAGAGGCTGAGGAGGTTGACCATGAAGGGCTCCCCTCATGGTTTTCTGGTGCTGATCGGAAGCTGTTAGGGAAGATGAAGAAGGGAGGTAAGGTGACACCGAATGCCGTGGTTGCTAAAGATGGAAGTGGTAAATTTAAAACCATTGCGAGTGCTATTGCCTCGTACCCGAAGGGGTTCAAAGGAAGATACATTATCTATGTCAGGGCTGGGGTTTATGATGAGTACATCACCGTCCCCAAACAAGCTGTGAATTTGCTCTTGTATGGAGATGGCCCTACAAGGACCATTGTCACTGGTCACAAGAACTTTGTAGATGGTGTGAAGACAATGCAAACTGCCACCTTTGCCAATACTGCTGTAGGATTCATCGCCAAATCAATGGCATTTGAGAACACAGCCGGTCCCGCCAAACACCAAGCAGTTGCCTTCCGGAACCAGGGAGACATGTCAGCTTTCTTTGACTGCGCCATGCGCGGCTTCCAAGACACCTTGTACGTCCAAGCGAATCGTCAATTCTACCGCAACTGTGAAATCTCTGGCACGGTGGACTTCATCTTTGGCGCCTCGGCGACCCTCATCCAGAATTCTAGAATCATCGTGCGGAAGCCAGGACCCGGCCAGTTCAACACTGTGACCGCAGACGGCACAAAACAAAGAAACATGGCCACAGGGATCGTGATCCAGAATTGTGAGATAGTTCCGGAAAGGGCCTTGTTCCCTCAAAGGTTTCAGTTCAAGTCGTATCTTGGAAGGCCATGGAAGGCTTATGCTAAAACAGTGGTCATGGAGTCGAATTTGGGTGATTTTATTCAGCCAGTAGGGTGGAGTGTTTGGGAAGGGAATCAGTTTCTCGATACATTGTATTATGCTGAACATGCTAACGTGGGACCTGGCGCTAACCTTAAAAGAAGGGTTAGGTGGAAGGGTTACCATCCCAATATTAATAAGAATGAGGCTGCACAATTCACTGCTGGCCAGTTCCTCAGAGCTGGACCTGCTGGAAGAGCTGAGGATTGGTTGAAGGCTACTGGCGTTCCTTTCACCAACAAAACAGTTGCCTCCGCCGTTTCTCTCATTCTCGTTGTGGGTGTTGTCGTCGGCGTGGTTGCACTTGTCCGCACTAACAATGACAATAGCGCGGCCCCTGAAACCGGCAACAACAATGACATAAACACACATAGCAAATCTGTGCAGGCCGTGTGCCAAAACGCCGAAGACAAGAAGCTATGCACTGATACTCTCAAACCAGTGAGCGACTCAGACGATCCAAAGGAGTACATCGCAACGGTGGTGAAAACCTCCATGGACAGCCATGGAAACAGCAATAGCAGCATCAAGATGGCCCTGGAGGATTGCAAGGACTTGTTACAGTTTGCCATTGAGGAGTTACAAGCGTCCAAGGTCCTAGTCAAGGACAATAATATGAACAATGTGAACGAGCGTGCAGCTGACCTGAAAAACTGGTTGGGTGCGGTACTTGCATACCAGGAATCATGCCTTGACGGGTTCAACACAGACGCTGAGAAGAAGATCCAGTCTCAGCTGCAAACGGGGAGCTTGGATGACGTGGGGAAGTTGACGGCATTGGCGCTTGATATTGTTTCTGGGATCTCAAAAGTGTTGTCTGCCATGAACTTGACTTTGGAAGTAAAACCTTCGTCTCGCCGCCTTCTTGAGGTGGATCAGGATGGGTTACCATCTTGGATATCGGGTGCGGATCGAAAGCTCTTGGCAGAGATGAAAAATGGAGGTTCGGTTCCGCCAAATGCGGTGGTTGCCAAGGATGGAAGTGGCCAGTATAAGAGTATTCTTGATGCTATTAACGCCTACCCTAAAAAGCATAAGGGTAGGTACGTGATCTATGTTAAGGCCGGTGTCTATGATGAGTACATTCAGATTGACAAGAAAAAACCTAATATTTTGATGTACGGGGATGGCCCTAAGAAGACTGTTATCACTGGTAATAAAAATTTCGTAGATGGATACAAGACTATGAGATCTGCCACGTTCACGACTGTTGCTCCAGATTTCATGGCCAAGTCAATGGGATTTGAGAACACAGCCGGCGCCAGCAAGCACCAAGCAGTAGCGCTTCGCGTGCAAGGAGACCGCTCGGCTTTCTTCGACTGTGCTATAAGCGGCTATCAAGACACCTTATATGCCCACGCCCACCGCCAGTTCTACCGAAACTGCGAAATCTCCGGCACGGTGGACTTCATCTTCGGCTACTCAACACTCCTAATCCAAAGCTCCAAGCTCATAGTGAGAAAACCCGGTAAGAATCAGCAAAACATAGTAGTGGCCGACGGAACAGCCCAGAAGAACATGCCCACAGGAGCAGTGATCCAGAACTGCCAGATCGTGCCGGAGCCAAGCCTTGCCGCGGATAAGTCCGTGAGGACGTACCTGGCTCGGCCGTGGAAGGCCTATTCAAGGGCGATCTTCATGGAGAATAACATTGGTGACTTGATCCAGCCAGATGGGTTTCTTCCTTGGCAAGGAACCCAGTTTCTTGACACGTGCTTTTTTGCGGAGTTTGGGAACACTGGATCAGGTGCCAATGTTCAGAAGAGAGTCAAGTGGGGAAAAGGTGTTCTTAGCAAAGGTGATGCTATTAAATACACTGCTGATCAGTGGCTCCAAGCAGGCGAGTGGTTACCGGCTACCGGCATACCCTATGATCCTGGCTTCACTAAAGCATGA | 3369 | 0.4954 | MNTKIIASGVSLILVVGVAIGVVVVVNKKDTTDPVVAAQQKSVKSMCEGTEDPKLCHDTLSTVKPTNSSDPNAYIAAVVEATAKSVIQAMNMSDRLTVDHGGKDPGMKMALDDCKDLMQFAIDSLESATNLVRDNNIQAVHEQTPDFRNWLSAVMSYQQSCMEGFEDGKSGEEAVKGQLQEGSLDQMGKLTGIALDIVSDLSRILQTFDLKLDLNPASRRLLEAEEVDHEGLPSWFSGADRKLLGKMKKGGKVTPNAVVAKDGSGKFKTIASAIASYPKGFKGRYIIYVRAGVYDEYITVPKQAVNLLLYGDGPTRTIVTGHKNFVDGVKTMQTATFANTAVGFIAKSMAFENTAGPAKHQAVAFRNQGDMSAFFDCAMRGFQDTLYVQANRQFYRNCEISGTVDFIFGASATLIQNSRIIVRKPGPGQFNTVTADGTKQRNMATGIVIQNCEIVPERALFPQRFQFKSYLGRPWKAYAKTVVMESNLGDFIQPVGWSVWEGNQFLDTLYYAEHANVGPGANLKRRVRWKGYHPNINKNEAAQFTAGQFLRAGPAGRAEDWLKATGVPFTNKTVASAVSLILVVGVVVGVVALVRTNNDNSAAPETGNNNDINTHSKSVQAVCQNAEDKKLCTDTLKPVSDSDDPKEYIATVVKTSMDSHGNSNSSIKMALEDCKDLLQFAIEELQASKVLVKDNNMNNVNERAADLKNWLGAVLAYQESCLDGFNTDAEKKIQSQLQTGSLDDVGKLTALALDIVSGISKVLSAMNLTLEVKPSSRRLLEVDQDGLPSWISGADRKLLAEMKNGGSVPPNAVVAKDGSGQYKSILDAINAYPKKHKGRYVIYVKAGVYDEYIQIDKKKPNILMYGDGPKKTVITGNKNFVDGYKTMRSATFTTVAPDFMAKSMGFENTAGASKHQAVALRVQGDRSAFFDCAISGYQDTLYAHAHRQFYRNCEISGTVDFIFGYSTLLIQSSKLIVRKPGKNQQNIVVADGTAQKNMPTGAVIQNCQIVPEPSLAADKSVRTYLARPWKAYSRAIFMENNIGDLIQPDGFLPWQGTQFLDTCFFAEFGNTGSGANVQKRVKWGKGVLSKGDAIKYTADQWLQAGEWLPATGIPYDPGFTKA* | 1123 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja5g1278 | 1122 | PANTHER | PECTINESTERASE | 3 | 570 | - | - | |
| Lja5g1278 | 1122 | PANTHER | PECTINESTERASE | 572 | 1118 | - | - | |
| Lja5g1278 | 1122 | ProSitePatterns | Pectinesterase signature 2. | 955 | 964 | IPR033131 | - | |
| Lja5g1278 | 1122 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 613 | 760 | IPR035513 | - | |
| Lja5g1278 | 1122 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 37 | 203 | IPR035513 | - | |
| Lja5g1278 | 1122 | PANTHER | PECTINESTERASE | 3 | 570 | - | - | |
| Lja5g1278 | 1122 | PANTHER | PECTINESTERASE | 572 | 1118 | - | - | |
| Lja5g1278 | 1122 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 612 | 737 | IPR006501 | GO:0004857 | |
| Lja5g1278 | 1122 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 19 | 176 | IPR006501 | GO:0004857 | |
| Lja5g1278 | 1122 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 617 | 757 | IPR035513 | - |
Showing 1 to 10 of 24 entries
Duplication type information
Functional genes information
Pathway information
Event-related genes