Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1271 ATGGGCAAAACTCTTTTACACATGCAAGTAATGCTCTCTAGCTTGGTGCTCATTCTCTCAATTTCATCACTAGCATCATCATCAACATCTCTTAAGGTGGATTTCTATAAGACCACATGTCCATCCGCTGAGGCAATAGTGAGAAGAGCTGTTAACAAAGCAGTTTCACTCAACCCAGGCATTGCTGCTGGCCTAATCAGACTGCATTTTCATGATTGCTTTGTCAGGGGTTGTGATGGTTCTGTATTACTACAATCCACACAAGCTGGTAACCCATCTGAGAGAGACCACCCTGCAAACAATCCAAGCCTACGCGGCTTCGAGGTCATCGATGAAGCCAAGGCCGAAATAGAAGCCCACTGTCCCGAAACCGTGTCGTGTGCTGACATTCTTGCATTCGCAGCACGAGACAGCGCTAAGAAAGTCGGAGGCATAAACTACGCGGTAGCTGCAGGACGCAGAGATGGTCGAATCTCCATCAGTGACGAAGTGACACAGAATCTGCCACGACCATCCTTCAAAGCTGAGGAGCTCATTAGAAATTTCGCTCGAAAAAGGCTATCAGTAGATGAAATGGTTACACTTTCTGGGGCTCACTCTATTGGTGTCTCACATTGTTCTTCTTTCTCTGATCGCTTATACTCTTTCAATTCCACTTCCTCTCAATCTCAAGATCCCTCTATGGATTCCAACTTTGCTGCCTTGTTGAAATCTGAGTGTCCTCGTGATAGCGCAGCAGCCGCAAGTTCAACGGTGGTGTTTGATGGTTACACGCCTAATCGTTTGGACAGCAAGTACTACAAGGGGTTGAAGAATCACCGTGGTTTGTTGACATCGGATCAGACGTTGATGAGTGACCGCTCTACAAGGAAAATGGTGGTGAACAATGCTAATCATGGTTCAACTTGGGCTGTGAAGTTTGCAGATGCAATGGTTAAGATGGGTTCCATTGATGTGCTAACAAGTCCACAAGGTGAGGTTAGGAAGTATTGCAGCATTGTCAACTAA 1008 0.4603 MGKTLLHMQVMLSSLVLILSISSLASSSTSLKVDFYKTTCPSAEAIVRRAVNKAVSLNPGIAAGLIRLHFHDCFVRGCDGSVLLQSTQAGNPSERDHPANNPSLRGFEVIDEAKAEIEAHCPETVSCADILAFAARDSAKKVGGINYAVAAGRRDGRISISDEVTQNLPRPSFKAEELIRNFARKRLSVDEMVTLSGAHSIGVSHCSSFSDRLYSFNSTSSQSQDPSMDSNFAALLKSECPRDSAAAASSTVVFDGYTPNRLDSKYYKGLKNHRGLLTSDQTLMSDRSTRKMVVNNANHGSTWAVKFADAMVKMGSIDVLTSPQGEVRKYCSIVN* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1271 335 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Lja5g1271 335 PANTHER PEROXIDASE 25-RELATED 15 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 SUPERFAMILY Heme-dependent peroxidases 31 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 CDD secretory_peroxidase 32 334 IPR033905 GO:0004601|GO:0042744
Lja5g1271 335 ProSiteProfiles Plant heme peroxidase family profile. 30 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 Gene3D Peroxidase, domain 2 169 314 - -
Lja5g1271 335 PANTHER PEROXIDASE 15 333 - -
Lja5g1271 335 Gene3D - 34 335 - -
Lja5g1271 335 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 Pfam Peroxidase 47 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g1271 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1271 Lja-Chr5 12752185 12753732 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1271 14 335 Peroxidase AT4G11290 44.308 7.40e-85 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1271 K00430 - gmx:100813563 458.373