Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1264 ATGAAAGCTGCTTTTATTCCTGAGGTCAATGATGAATTAGATACTCAAAATTTTGAGAAGTTTGAGGAGGTGGACAACCAAACTCAACCTTCCTCAAAAGCAGGCCCATGGAGAAAGATGCTGTCATCTAAAGATGTTAACTTCATCGGTTACACATACAAGAACTTTGAAATCGTGAATGATGATCAACTGCATGGAATTGGTTTGTACATCTTCATTATTATACTTGACCACTAA 237 0.3671 MKAAFIPEVNDELDTQNFEKFEEVDNQTQPSSKAGPWRKMLSSKDVNFIGYTYKNFEIVNDDQLHGIGLYIFIIILDH* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1264 78 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 66 - -
Lja5g1264 78 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 66 - -
Lja5g1264 78 ProSiteProfiles AGC-kinase C-terminal domain profile. 1 63 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lja5g1264 78 Pfam Protein kinase C terminal domain 9 53 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1264 Lja-Chr5 12693139 12694150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1264 1 68 AGC Kinase Gene Family AT4G14350 79.412 1.45e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1264 K08790 - gmx:100783095 132.109