Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja5g1233 | ATGGTGTCCAAACCTACGGACTCTGCTCTCAAACTTCCTCGAAAACAGCATGAAGAGCCAGAAAATTATGCTGTTGGTGTTGGGAACAACTTGTACACCAAGATAAATCAGCTGAAAAAGCAAATCCAGGAAGAGAGAATTGTATACGTTAAAGAAAAACTTCAAAAGAATGAGAAGATGCTAGAATGTCATATTTCAAGAGTCGTGTCAGCAATATCAACCAGGGACTCTTCACAGACGGAGGAAAATAGGACACATTCACTTCTTTCCTCCAGGATCGGCCATCCTTTATGTAAACTTAATGGTTTCTCTCAGGCTTCAGGGGACAAAGACTATAACAATCAAGATGTATCATCTGCTACAAGCATCAAGATTCCACATATTGAAAGATTACCACCATATACATCTTGGATATTTTTGGACAAAAATCAGAGAATGGCTGAAGATCAGTCAGTTGTTGGAAGAAGACGTATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAGTTAACAGAACCTGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTGCTATATGGATGGCATTTGAGGAACATGGAATAAATGAGGAGGTATTGAATATTGTTAGCAAGTTTGTTGGGGGCACCAGTTTAGAAATTCAGGAGAGGTACAAAAGTATCAAGGAAAATAACAATGGTAGGTTAGGCCGTCATTCAGAAGGCTCAGGAGAATACAAATCTCATATTGGCATATGTCCAGAGAAAAGTTTGAGTGCTGCATTAGATTCTTTCGATAACCTTTTCTGTCGCCGGTGCCTGATTTTTGACTGTCGCCTGCATGGATGTTCTCAACCTTTAATATATCCTAGTGAAATGCAGACAGTTTTGCCTGGGCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGTTAAAGGTTATCAAAAGTGTGTCGGGAGATTCAACTCGTGAGTCTTTTCAGGATAAAAAAACTACAATTATAGAAGAGGCTGACGGGATATTGGCACCCTCCAGTGCAGGGGAACTTGGTAATCAGGGTGCTACACTTCCGACAGAAATGGCTGGTCATGAAAATCTCAATTTGAATGTTCCTGTCTCAGAAAATTTGGGGAAACGGAAGGTCACAAATCAATCAGATACAGCACTATGTGACTCCTCTATATTACCTCCTGATGATTCTCACAATTCTTGTAAAAAGCTGAAGAGAATCTCCGATGATACAGTCACTGCAATAAGTGATAATAACGAGAACCTTAATTTGGACGCATGTGGTGAAAGTAAACATGGAGTTTCGGGAAAATCTGTAGAACATCCTTCAAATAAATTAATATTTTCTTCTAGCACTTGCCATGGTGAGCATGATGAGAGTGTCAAGGATGGACCAAAAGATGTCACAAATGAGACAGAATTTAATAAGTTGTTCAATTCAATGGGAGGGCAAGTTGATGGGATGCTAAGTCTCTCGGACTGGAAACCTCTGGAGAAAGACTTATACTTGAAGGGAGTAGAAATGTTCGGAAGAAACAGTTGTCTCATAGCAAGGAACTTGCTTTCTGGTTTGAAGACTTGCATGGAAATAGCTAGTTACATGCATGCTGGAGGAGTGTTGATGCCCTACGGGTCTTTTGCTGCATCTAGTTCAATCATGGACGACAAGGGAAAATTTGATGCAGAGTGCCAAGACCAAGACATATCATCTAGGTCACGGACGCTGCTGAGAAAGAGGGGCAAAACAAGAAAGTTTAAATATTCTTGGAAGTCTGCTGGCCATCCATCAATATGGAAAAGGATTGCTGATGGAAAGAACCAATCTTGCCAGCAGTATACACCATGTGGATGTCAGTCAATGTGTGGAAAGGATTGTTCTTGTATGAATGGTGGAACTTGCTGCGAAAAATATTGTGGTTGTTCAAAGAGCTGCAAAAACCGGTTCAGAGGATGCCATTGTGCCAAGAGTCAATGCAGAAGCCGACAATGTCCATGCTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGTCGAAATTGCTGGGTTAGCTGCGGGGATGGTTCGCTAGGGGAGCCACCTCGGCATGGAGAAGGTCAATGCGGCAATATGAGGCTTCTGTTAAGGCAACAACAGAGGATTCTCTTGGCAAAGTCTGATATTGCTGGATGGGGAGCCTTCTTGAAGAACCCTGTTAACAAAAATGATTACCTAGGAGAGTACACTGGTGAACTGATCTCCCACCGAGAAGCTGATAAACGTGGGAAAATATATGATCGTGCGAATTCATCTTTCCTTTTTGACTTAAATGATCAGGCATGTGTCTCATTGTCTCAGCATGGTCTACTTTTTTCTCTTAACATCGGCTACTCTGGCTTTTCTCAAATTGCTTACGTTCTCGATGCTTATCGCAAAGGAGACAAGTTGAAATTTGCAAACCACTCATCAAACCCCAACTGCTATGCAAAGGTAATGCTGGTTGCTGGAGATCACCGAGTAGGGATATTCGCCAAGGAACACATTGAAGCTAGTGAGGAGCTCTTCTATGATTATCGCTACGGTCCAGATCAAGCGCCCCCATGGGCTCGTAAACCAGAGGGTTCCAAGAGAGATGAATCAGCAGTTCCTCAAGGCAGAGCAAAGAAACACCAGTCTCATTGA | 2685 | 0.4231 | MVSKPTDSALKLPRKQHEEPENYAVGVGNNLYTKINQLKKQIQEERIVYVKEKLQKNEKMLECHISRVVSAISTRDSSQTEENRTHSLLSSRIGHPLCKLNGFSQASGDKDYNNQDVSSATSIKIPHIERLPPYTSWIFLDKNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEPEEEKHEFSEAEDRAIWMAFEEHGINEEVLNIVSKFVGGTSLEIQERYKSIKENNNGRLGRHSEGSGEYKSHIGICPEKSLSAALDSFDNLFCRRCLIFDCRLHGCSQPLIYPSEMQTVLPGPEGDRKPCSDQCYLQLKVIKSVSGDSTRESFQDKKTTIIEEADGILAPSSAGELGNQGATLPTEMAGHENLNLNVPVSENLGKRKVTNQSDTALCDSSILPPDDSHNSCKKLKRISDDTVTAISDNNENLNLDACGESKHGVSGKSVEHPSNKLIFSSSTCHGEHDESVKDGPKDVTNETEFNKLFNSMGGQVDGMLSLSDWKPLEKDLYLKGVEMFGRNSCLIARNLLSGLKTCMEIASYMHAGGVLMPYGSFAASSSIMDDKGKFDAECQDQDISSRSRTLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCQQYTPCGCQSMCGKDCSCMNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRHGEGQCGNMRLLLRQQQRILLAKSDIAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQACVSLSQHGLLFSLNIGYSGFSQIAYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPPWARKPEGSKRDESAVPQGRAKKHQSH* | 895 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja5g1233 | 894 | SUPERFAMILY | SET domain | 621 | 863 | IPR046341 | - | |
Lja5g1233 | 894 | ProSiteProfiles | SET domain profile. | 720 | 860 | IPR001214 | GO:0005515 | |
Lja5g1233 | 894 | CDD | SET_EZH | 720 | 861 | - | - | |
Lja5g1233 | 894 | Pfam | CXC domain | 659 | 690 | IPR041355 | - | |
Lja5g1233 | 894 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Lja5g1233 | 894 | MobiDBLite | consensus disorder prediction | 458 | 477 | - | - | |
Lja5g1233 | 894 | SMART | CXC_2 | 655 | 692 | IPR033467 | - | |
Lja5g1233 | 894 | MobiDBLite | consensus disorder prediction | 871 | 887 | - | - | |
Lja5g1233 | 894 | Gene3D | SET domain | 621 | 862 | IPR046341 | - | |
Lja5g1233 | 894 | ProSiteProfiles | CXC domain profile. | 607 | 706 | IPR026489 | - | |
Lja5g1233 | 894 | Pfam | SET domain | 731 | 859 | IPR001214 | GO:0005515 | |
Lja5g1233 | 894 | MobiDBLite | consensus disorder prediction | 866 | 894 | - | - | |
Lja5g1233 | 894 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 1 | 894 | IPR025778 | GO:0031519 | |
Lja5g1233 | 894 | Coils | Coil | 35 | 55 | - | - | |
Lja5g1233 | 894 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) | 805 | 892 | IPR045318 | GO:0006338|GO:0018024 | |
Lja5g1233 | 894 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE | 805 | 892 | - | - | |
Lja5g1233 | 894 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE | 29 | 782 | - | - | |
Lja5g1233 | 894 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) | 29 | 782 | IPR045318 | GO:0006338|GO:0018024 | |
Lja5g1233 | 894 | SMART | set_7 | 720 | 866 | IPR001214 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja5g1233 | Lja-Chr5 | 12382233 | 12391677 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja5g1233 | 709 | 863 | C2H2 Transcription Factor Family | AT2G23740 | 24.528 | 5.19e-09 | 58.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Lja5g1233 | SET | 1.2e-10 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja5g1233 | - | - | gmx:100808730 | 1401.73 |