Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1185 ATGGCTTTCAAGCAATGCTCCTTTCTTACTTTCTCAATTTCCTATCTTCTTTCCTTCTTGGTCTTGTCATCACAATCCATAGCAAATGGTGGTTCACCTTCCAACATTACACCTGAAACCATATGCCAATCCACTCGAGACCCTACTTATTGTAAAAATGTCCTTGCCAATCAAGCCGGCAACATCTTCGACTATGGCCGCATTTCCATTCGAAAGTCCATGTCTCAATCTCGTAACTTCTTGAACCTAGTGGACTCATATCTTAAAGCTAGTTCTTCTTTGTCTCAATCTACAGTTCGTGCCCTTGAAGATTGTAGATTACTAGCAGACCTTAGTTCAGAATATTTATCAAAAACCTACTGCTGTTTTGACCAACCAAAAACATGTTTAGATGGCATTCAAACCATAACTTCTAATACAAGAGTGAAGAACGACCTATCATTGTCACTCTCTGATGACACAAAGCTTCATAGTGTCACCCTAGCATTGTTCCAAAAAGGTTGGGTGCCTCAGAAGAAAGTCCAAACTTTGTGGTCACAAAACAGGAGGCATTTGAATTTCAAAAACGGTCGTTTACCACTGAAGATGCCAGACAAAGTATGTGCTATTTATGACTCTGCTAGAAACCATGGAAGAAAGTTACTTCAAACTGGCACTGGTGATGATAGTGTTGTGGTGAATGACATAGTGGTGGTTAGTCAAGATGGAAGCGAGAACTTTACCACCATCAATGCTGCAGTAGCTGCCGCACCAAATAACACAGTTGCAAATGGTGGCTACTTCATGATTTTTATCAAACAAGGTGTGTATCAAGAGTATGTATCCATAGACAAAACGAAGAAGTACTTGATGTTGATTGGAGAAGGAATCAACCGTACAATTATAACTGGAAATCACAATGTTGTGGATGGATCCACAACATTCAACTCAGCAACATTTGCTGTGATCGCTCAAGGGTTTGTAGCTGTTAACATAACATTCCGCAACACAGCTGGACCAAGCAAGCACCAAGCAGTTGCGATAAGAAGTGGAGCAGACATGTCCACCTTTTACAAGTGCAGTTTTGAAGGATATCAAGACACACTGTATACTCATTCTTTGAGGCAATTTTATAGAGAATGTGCTATATATGGCACGGTTGACTTCATATTTGGAAATGCAGCTGCAGTTTTGCAAAATTGCAACATCTATCCACGCCTTCCACTCAGTGGACAATTCAATACCATCACAGCTCAAGGTCGAACTGACCCAAATCAAAACACAGGAACTTCAATACAAAACGCAAATATTAAAGCAGCGGACGATTTGGCTCCGAATGTTGGTATTGTGAGAACTTATCTTGGGAGACCATGGAAACAATATTCAAGGACAGTTTTCATGCAGTCCTTCATAGATAGTTTTATAAACCCTGCTGGTTGGAGTGAATGGAATGGCACTTTTGCGTTGAGCACCTTGTTGAGCACCTTGTACTATGCAGAATATAATAACACGGGGCCTGGTTCAAATACTTCCAAGAGAGTGACATGGCCTGGTTATCATGTTATCGATGTTGCAAGTGCAACTAATTTCACAGTATCTAACTTCTTGAGCGGAAATGGTTGGCTTCCTCAAACTGGTGTCCCTTACTTAAGTGGATTAAAATAG 1644 0.4063 MAFKQCSFLTFSISYLLSFLVLSSQSIANGGSPSNITPETICQSTRDPTYCKNVLANQAGNIFDYGRISIRKSMSQSRNFLNLVDSYLKASSSLSQSTVRALEDCRLLADLSSEYLSKTYCCFDQPKTCLDGIQTITSNTRVKNDLSLSLSDDTKLHSVTLALFQKGWVPQKKVQTLWSQNRRHLNFKNGRLPLKMPDKVCAIYDSARNHGRKLLQTGTGDDSVVVNDIVVVSQDGSENFTTINAAVAAAPNNTVANGGYFMIFIKQGVYQEYVSIDKTKKYLMLIGEGINRTIITGNHNVVDGSTTFNSATFAVIAQGFVAVNITFRNTAGPSKHQAVAIRSGADMSTFYKCSFEGYQDTLYTHSLRQFYRECAIYGTVDFIFGNAAAVLQNCNIYPRLPLSGQFNTITAQGRTDPNQNTGTSIQNANIKAADDLAPNVGIVRTYLGRPWKQYSRTVFMQSFIDSFINPAGWSEWNGTFALSTLLSTLYYAEYNNTGPGSNTSKRVTWPGYHVIDVASATNFTVSNFLSGNGWLPQTGVPYLSGLK* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1185 547 Pfam Pectinesterase 230 532 IPR000070 GO:0030599|GO:0042545
Lja5g1185 547 Pfam Plant invertase/pectin methylesterase inhibitor 39 144 IPR006501 GO:0004857
Lja5g1185 547 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 127 545 - -
Lja5g1185 547 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 34 124 - -
Lja5g1185 547 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 124 IPR035513 -
Lja5g1185 547 ProSitePatterns Pectinesterase signature 1. 257 276 IPR018040 -
Lja5g1185 547 CDD PMEI-like_3 40 168 - -
Lja5g1185 547 ProSitePatterns Pectinesterase signature 2. 376 385 IPR033131 -
Lja5g1185 547 SMART PMEI_2 33 163 IPR006501 GO:0004857
Lja5g1185 547 SUPERFAMILY Pectin lyase-like 226 545 IPR011050 -
Lja5g1185 547 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 166 IPR035513 -
Lja5g1185 547 Gene3D - 228 547 IPR012334 -
Lja5g1185 547 PANTHER PECTINESTERASE 127 545 - -
Lja5g1185 547 PANTHER PECTINESTERASE 34 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1185 Lja-Chr5 11883447 11885385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1185 8 546 Carbohydrate Esterase AT1G02810 54.949 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1185 K01051 - gmx:100813051 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1185 5 11883447 11885385 Lja5g1185 5 11883447 11885385 ECH