Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1184 ATGGCTCTCAAAAGCTTCTCCCTCTTGACATTTTTCATTTCCTATCTCTTTTCTTTCTTGGTCTTGGAGCTGGCATTAGCTGATGGAGGGTCATTACCCTCCACCATTCCACCCGAAACCATTTGCCAGTCCACCGGAGACCCTGCTTATTGTAAAAATGTTCTTGCCAATCAAAATGGCAACATCTTTGACTATGGCCGCATTTCCATTCGAAAGTCCATGTCTCAGTCCCGCAACTTCTTGAACCTAGTGGACTCATATCTTCAAGGTAGCTCATCTTTGTCTCAATCCACAGTCCGCGCCCTTGAAGATTGCAAATTCCTAGCAGACCTCAGTTCAGAATACTTATCAAACACCTACACTACAACAAATCAAGCTAGTGGTGTTCTTCCCGATTCTCAAGCGGAAGATTTCAAAACATTTCTCAGTGCCGTTTTGACTAACCAACAAACATGTTTAGATGGCCTTCAGACTACAACTTCTGATCCAAGAGTCAAGAACGACCTTTCATCGTCACTCTCTAATGACATGAAGCTTCACAGTGTCACATTGGCCTTGTACCTTAAAGGTTGGGCGCCTCAGAAGAATATCAAAACCTCATGGCCACAAAATGGGAGACATTTGAATTTCAAAAACGGTCGCTTACCATTGAAGATGTCGGACAAAGCACGTGCTATTTTTGATTCTGCTAGAAACCATGGAAGAAAATTACTTCAAACTAGCACTGGTGACGATAGTGTTGTGGTAAATGACATAGTGGTGGTTAGTCAAGATGGGAGCGGAAACTTCACCACTATCAATGATGCAATAGCTGCTGCACCTAATAACACAGCCGCAAATGGTGGTTACTTCTTGATTTTTATCAAACAAGGTGTGTATCAAGAGTATGTATCTATAGACAAAAAGAAGACGTACTTGATGCTAATTGGAGAAGGAATCAACCGAACAATTATAACCGGCAATCACAATGTTGATGATGGTTCCACAACATTCAACTCAGCAACATTTGCTGTAGTCGCTCCAGGGTTTGTAGGAGTTAACATAACATTCCGCAATACAGCTGGACCAAGCAAGCACCAAGCAGTTGCAGTGAGAAGTGGAGCGGACATGTCCACCTTTTACAGTTGCAGCTTTGAAGGATATCAAGACACATTGTATACACATTCTTTGAGGCAATTTTATAGAGAATGTGATATATATGGTACGGTTGACTTCATATTTGGAAATGCAGCTGTAGTTTTGCAAAACTGCAACATCTATCCACGCCTTCCACTTAGCGGACAATTCAATACCATCACAGCTCAAGGTCGAACTGACCCAAATCAAAATACAGGAACTTCAATACAAAATGCAAATATTAAGGCAGCTGATGATTTGGCTCCGAATGTTGGTACTGTGAGAACATATCTTGGGAGACCATGGAAACAGTATTCAAGGACAGTTTTCATGCAGTCCTTCATGGATAGTTTTATAAACCCCGCTGGTTGGAGTGAATGGAGTGGTGATTTTGCATTGAGTACCTTGTACTATGCTGAATATAATAACACAGGACCTGGTTCAAACACTTCAAATAGAGTGACGTGGCCTGGTTATCATGTTATCAATGCTACCGATGCAGCTAATTTTACTGTGTCTAACTTCTTAAGCGGGGATAGCTGGATTCCTCAAACTGGTGTTCCATACTCAAGTGGATTGATATAG 1701 0.4168 MALKSFSLLTFFISYLFSFLVLELALADGGSLPSTIPPETICQSTGDPAYCKNVLANQNGNIFDYGRISIRKSMSQSRNFLNLVDSYLQGSSSLSQSTVRALEDCKFLADLSSEYLSNTYTTTNQASGVLPDSQAEDFKTFLSAVLTNQQTCLDGLQTTTSDPRVKNDLSSSLSNDMKLHSVTLALYLKGWAPQKNIKTSWPQNGRHLNFKNGRLPLKMSDKARAIFDSARNHGRKLLQTSTGDDSVVVNDIVVVSQDGSGNFTTINDAIAAAPNNTAANGGYFLIFIKQGVYQEYVSIDKKKTYLMLIGEGINRTIITGNHNVDDGSTTFNSATFAVVAPGFVGVNITFRNTAGPSKHQAVAVRSGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPLSGQFNTITAQGRTDPNQNTGTSIQNANIKAADDLAPNVGTVRTYLGRPWKQYSRTVFMQSFMDSFINPAGWSEWSGDFALSTLYYAEYNNTGPGSNTSNRVTWPGYHVINATDAANFTVSNFLSGDSWIPQTGVPYSSGLI* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1184 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 186 IPR035513 -
Lja5g1184 566 Pfam Plant invertase/pectin methylesterase inhibitor 39 186 IPR006501 GO:0004857
Lja5g1184 566 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 25 564 - -
Lja5g1184 566 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 187 IPR006501 GO:0004857
Lja5g1184 566 Pfam Pectinesterase 253 551 IPR000070 GO:0030599|GO:0042545
Lja5g1184 566 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Lja5g1184 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 189 IPR035513 -
Lja5g1184 566 SUPERFAMILY Pectin lyase-like 249 564 IPR011050 -
Lja5g1184 566 CDD PMEI-like_3 40 186 - -
Lja5g1184 566 ProSitePatterns Pectinesterase signature 1. 280 299 IPR018040 -
Lja5g1184 566 SMART PMEI_2 33 186 IPR006501 GO:0004857
Lja5g1184 566 Gene3D - 247 565 IPR012334 -
Lja5g1184 566 PANTHER PECTINESTERASE 25 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1184 Lja-Chr5 11871367 11873650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1184 12 566 Carbohydrate Esterase AT1G02810 58.722 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1184 K01051 - gmx:100813051 850.892